Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi390g00025 ATGGCAATCGAAAACCATGACACCACTATCCGGGAAATCAAGCCCAAGAACAGGAGAATCATGGGTGCTGGAGGCCCTGATGATGATGACAACAGGTGGCCGCCATGGTTGAAGCCTCTGCTCAAAGAGAGCTTCTTTGTTCAATGTAAGTTACATGCTGATTCTCACAAGAGCGAATGCAACATGTATTGCTTGGACTGTATGAATGGAGCTCTCTGCTCTCTCTGCCTCGCCTACCACAAAGATCATCGTGCTATTCAGATTAGGAGGTCCTCATACCATGACGTGATCAGGGTCTCTGAGATTCAGAAGGTGTTGGACATCACTGGCGTCCAAACCTACATTATCAACAGCGCAAGAGTGGTGTTCTTGAATGAGAGGCCTCAGCCAAGGCCTGGGAAAGGTGTTACAAACACTTGTGAAGTCTGTGAGCGTAGCCTTCTCGATTCTTACCGATTCTGTTCTCTGGGTTGCAAGATTGTAGGAACATCTAAGAATTTCCAGAAGAAGAAAAAGCATTCAGCAGCAATGGCATCAGACTCAGAGGATTCATACAGTAGCAACAGCAGCCATGGCCGTCAGAAGAACAGCAAAGTCCAGAGCTTCACACCATCCACACCACCCCCAACTTCTGTTAATTACAGAACAGCCAAGAGAAGAAAGGGAATACCGCACCGAGCCCCATTGGGGGGACTAATCATAGAATACTAG 711 0.4754 MAIENHDTTIREIKPKNRRIMGAGGPDDDDNRWPPWLKPLLKESFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLAYHKDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSYRFCSLGCKIVGTSKNFQKKKKHSAAMASDSEDSYSSNSSHGRQKNSKVQSFTPSTPPPTSVNYRTAKRRKGIPHRAPLGGLIIEY 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi390g00025 236 Pfam PLATZ transcription factor 89 160 IPR006734 -
Sebi390g00025 236 MobiDBLite consensus disorder prediction 172 223 - -
Sebi390g00025 236 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 28 229 - -
Sebi390g00025 236 MobiDBLite consensus disorder prediction 179 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi390g00025 Sebi-Chr390 417044 418771 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Sebi390g00025 PLATZ 7.3e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi390g00025 - - gmx:100791221 439.884