Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi38g00205 ATGGCTGAGCATCGCAGCTCCGAAGCAGCTGTCGCAGCGGGAGCCCCAGAGCTTCGCCGAAAAAGAGTGGATTCAGAAGGTGACGATGATGGAAACCGTGAAGAAGACGAGAGAGAAGAGATAGAGGAACGAGTCGGTGAATCGCCGCTCGCCACCGAGTCGCAACGCGGCGAGTTACGGAGTTTTAGTGGACCTCCGGTAGAGTCCAATTCAGAAACCCTAGCTGCTGTTCCTTCTTCGGTTTTGCAGGATCGGAGTGCCGATTTGCAGGGGAGTGCTACTACTTTGAATTCGAGTGGCAAAGCCGAAAGTAAGGACACAGTTGAACCTCCTGAAAAGGAAATTATTGCAAGAGAAGCTGAAGCAGCACATGCACCTCCAACTCAGCTTCAGGTGTCTATGTCTTCAACTCCGTCGTCTGAATTATCTCCAAATTCTGTTACACAATCTTTATCACCCGTCCCTAGTCCAACTATACAAAAACAGAAAATGTCTCCTCCAAAGGTTAATAATATGCATGCGGCAGTAGTAGAAAAAAAAACTCCTTCTGGTGGTAAAACCTTATCTGCAATTTCTGTTGCAAGGACATCAGCATCTGATGGATACAACTGGAGGAAGTATGGTCAGAAGCAAGTGAAGAGTCCTACAGGTTCTCGAAGCTATTACAGGTGTACTCATTCAAACTGTAGTGCTAAGAAGATTGAATGCTGTGATCATTCAGGTCATGTGATAGAGATTGTTCATAAAAGTGAACACAGTCATGATCCCCCACGGAAGACTAATTCCATTAGGGAAAGTAAGGTTGTGTCTTCCAATGAACCTTCTGTAAAGAACAGTGTTCCTGAGCAGCATACCAGAGTTATGAAGGATTCTGATCCGTCCATTTCTTCAAAAGCTCTACAAGAAGTACCTTGCATTGCTGAAAAGAAACAACAAAACTCGTCTAATATCAGTGATAATGGGAAAATTATTTTGAAGGAGGATCTTGTAAATGAACCAGAGCCAAAAAAAAGAATGAAGAAAGGTGACTTAACAAACTTGGATTCTCCCGTAAAACCTGGAAAGAAACCCAATCTTGTTGTACATGCAGCAGGGGATGTGGGAATATCAGGCGATGGATACCGATGGCGCAAGTATGGACAGAAAATGGTGAAGGGGAATCAACATCCCAGAAACTACTACAGATGCACTTCTGCTGGATGTCCTGTCCGAAAGCACATTGAGAATGCTGTAGATAACTCAAATGCTGTCACTATAACATACAAGGGTGTACATGACCATGACATGCCTGTGCCCAAGAAACGACATGGCCCACCAAGTGCTCCTCTTGTGGCTGCTGCAGCACCTGCCGCCATGAACAATTTGCAGTTGAAGAAACCCGACTCGCCACAAAACCTGAAAAATTCTACTCAATGGTCAGTGGACACGGAAGGAGAGCTAACTGGGGAGGCCATGGACCTTGGGGGTGAGAAAGCAATGGAGTCAGCACGAACACTATTGAGCATAGGGTTTGAAATTAAGCCTTGCTGA 1530 0.4536 MAEHRSSEAAVAAGAPELRRKRVDSEGDDDGNREEDEREEIEERVGESPLATESQRGELRSFSGPPVESNSETLAAVPSSVLQDRSADLQGSATTLNSSGKAESKDTVEPPEKEIIAREAEAAHAPPTQLQVSMSSTPSSELSPNSVTQSLSPVPSPTIQKQKMSPPKVNNMHAAVVEKKTPSGGKTLSAISVARTSASDGYNWRKYGQKQVKSPTGSRSYYRCTHSNCSAKKIECCDHSGHVIEIVHKSEHSHDPPRKTNSIRESKVVSSNEPSVKNSVPEQHTRVMKDSDPSISSKALQEVPCIAEKKQQNSSNISDNGKIILKEDLVNEPEPKKRMKKGDLTNLDSPVKPGKKPNLVVHAAGDVGISGDGYRWRKYGQKMVKGNQHPRNYYRCTSAGCPVRKHIENAVDNSNAVTITYKGVHDHDMPVPKKRHGPPSAPLVAAAAPAAMNNLQLKKPDSPQNLKNSTQWSVDTEGELTGEAMDLGGEKAMESARTLLSIGFEIKPC 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi38g00205 509 MobiDBLite consensus disorder prediction 336 358 - -
Sebi38g00205 509 MobiDBLite consensus disorder prediction 248 295 - -
Sebi38g00205 509 SUPERFAMILY WRKY DNA-binding domain 366 430 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi38g00205 509 SMART WRKY_cls 370 429 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi38g00205 509 SMART WRKY_cls 198 256 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi38g00205 509 Gene3D WRKY domain 355 431 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi38g00205 509 Gene3D WRKY domain 185 258 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi38g00205 509 ProSiteProfiles WRKY domain profile. 365 430 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi38g00205 509 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 134 468 IPR044810 GO:0003700
Sebi38g00205 509 MobiDBLite consensus disorder prediction 54 104 - -
Sebi38g00205 509 Pfam WRKY DNA -binding domain 200 254 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi38g00205 509 Pfam WRKY DNA -binding domain 372 427 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi38g00205 509 MobiDBLite consensus disorder prediction 105 120 - -
Sebi38g00205 509 MobiDBLite consensus disorder prediction 248 262 - -
Sebi38g00205 509 SUPERFAMILY WRKY DNA-binding domain 195 257 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi38g00205 509 ProSiteProfiles WRKY domain profile. 193 257 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi38g00205 509 MobiDBLite consensus disorder prediction 128 167 - -
Sebi38g00205 509 MobiDBLite consensus disorder prediction 263 282 - -
Sebi38g00205 509 MobiDBLite consensus disorder prediction 1 168 - -
Sebi38g00205 509 FunFam WRKY transcription factor 358 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi38g00205 Sebi-Chr38 2820100 2825315 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi38g00205 133 509 WRKY Transcription Factor Family AT4G30935 55.614 8.99e-131 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi38g00205 WRKY 3.2e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi38g00205 - - gmx:100782194 678.707