Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi38g00198 ATGGATTCTAGACTATCTTCATCTTCAGATGCTGGAGTTAAAAAATCTGGATTTGGTATTGATAAATTAAACCATGGTGATCCTGGAAGCAGCACAACCTCTAGGTCTTTTAAAAGAGGAATGATAAAGGGTTCTGAAGGACTGAAGTCAATTGGTAGATCACTTGGATTGGGGGTATCTAGGGCCGTGTTCCCAGAAGATCTTAAAGTGTCAGAAAAGAAGATATTTGATCCTCAAGACAAATTTTTGCTCTTGTGGAATAAGCTTTTTGTTATCTCATGCATTTTGGCTGTGTCTGTGGATCCATTGTTTTTTTATCTCCCTGTCATCAATGATCAATTACACTGTCTCAGCATAGACCGAAAGTTGGCAACTATAGTTACCACTGTAAGGACAGTCGTTGATGCTTTCTATCTTATACACATGGCTCTCCAATTTCGTACTGCTTATATTGCTCCATCATCTCGTGTCTTTGGGCGGGGTGAGCTTGTGATAGATTCAGCACAGATAGCTAAGCGATACTTGCGGCGATATTTCATCATTGATTTCCTATCTGTGTTGCCGATACCACAGGTTGAAAAGATTGCTGTTATCTTGAGTCAATCTCCTTTTGTTAATGTTGCATGA 627 0.3955 MDSRLSSSSDAGVKKSGFGIDKLNHGDPGSSTTSRSFKRGMIKGSEGLKSIGRSLGLGVSRAVFPEDLKVSEKKIFDPQDKFLLLWNKLFVISCILAVSVDPLFFYLPVINDQLHCLSIDRKLATIVTTVRTVVDAFYLIHMALQFRTAYIAPSSRVFGRGELVIDSAQIAKRYLRRYFIIDFLSVLPIPQVEKIAVILSQSPFVNVA 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi38g00198 208 MobiDBLite consensus disorder prediction 1 37 - -
Sebi38g00198 208 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 67 200 - -
Sebi38g00198 208 SUPERFAMILY Voltage-gated potassium channels 77 193 - -
Sebi38g00198 208 Pfam Ion transport protein 85 191 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi38g00198 Sebi-Chr38 2778420 2779046 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi38g00198 1 192 Ion Channels AT2G23980 73.096 3.62e-93 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi38g00198 K05391 - gmx:100784327 340.502