Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi38g00183 ATGTTATGCATTACTTCGGACCCTGAAAATGCTCTAGAGACTTGGAAGTCACCAAGTGTTCATGTTTGTGATTGGTCAGGTGTCAGGTGCAACAATGCAAGTGACAGGATCATTGAGCTTGATCTAAGTGGAAGGCAGAATCCCACCACAACTGGAAATTGCATAGCACTGGAGTACCTCAACCTTTCTGGGGCAATACCAGAATCCTTGCAGTTGTCTTCCTCTCTCAAGACACTTAATTTCTCTTTTCAAACAAATTCTCAGGGAATGTCTCAAACAAGGGAGCATTTTCATCCTGACCATAGACTCTTTCCTGGGAAACAATGGTACTCCATGGTAATCAAGTCAAAAGTGAGAAAGAGATTTGAAATTGTTAGCAGAGGTGATTTGGAGGATGAAGAAGAGGAAACAAAACAGCTCAAGTTTGGACAGGTCTACAAAGGAGTCATCCTAGATAATACAAGAGTAGCAGTTAAGGTATTAGATACAGAAACAGCTGGTGATGAGAGTACATCCACCAACAGTAACTCAGCATCTTTCAGTTCAACACATGGCTTATTATGTGGCTCTATTGGCTATATAGCTCCCGAGTATGGAATGGGAAAACATGCTTCAACTGAGGGTGATGTTTACAGTTTTGGAGTAATTCTGTTAGAGATTGTGACAGGTAGACGCCCCACAGATGTCCTCATCCATGAAGGCTCTAGCTTGCATGAGTGGGTTAAGAGACAATACTTACAGCCACACAAGCTTGAAAACATTGTTGAACAAGCACTTCAAAGGTGCTCTCCTTCTGGCATGCCAAGCCATCATAACAAAATTTGGAAAGATATCATTTTGGAACTCATTGAGATGGGGATACTCTGCACACAGCAGAATCCTTCAACAAGACCAAGCATGCTGGATGTAGCCCAAGAAATGGGGAGGTTGAAGGACTACCTCCCAATTCTTTCTGCAGTGAAGATAATTTAG 972 0.4228 MLCITSDPENALETWKSPSVHVCDWSGVRCNNASDRIIELDLSGRQNPTTTGNCIALEYLNLSGAIPESLQLSSSLKTLNFSFQTNSQGMSQTREHFHPDHRLFPGKQWYSMVIKSKVRKRFEIVSRGDLEDEEEETKQLKFGQVYKGVILDNTRVAVKVLDTETAGDESTSTNSNSASFSSTHGLLCGSIGYIAPEYGMGKHASTEGDVYSFGVILLEIVTGRRPTDVLIHEGSSLHEWVKRQYLQPHKLENIVEQALQRCSPSGMPSHHNKIWKDIILELIEMGILCTQQNPSTRPSMLDVAQEMGRLKDYLPILSAVKII 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi38g00183 323 Pfam Leucine rich repeat N-terminal domain 5 31 IPR013210 -
Sebi38g00183 323 SUPERFAMILY Protein kinase-like (PK-like) 181 314 IPR011009 -
Sebi38g00183 323 Gene3D Transferase(Phosphotransferase) domain 1 147 315 - -
Sebi38g00183 323 Gene3D Ribonuclease Inhibitor 3 97 IPR032675 -
Sebi38g00183 323 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 181 307 - -
Sebi38g00183 323 ProSiteProfiles Protein kinase domain profile. 1 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi38g00183 323 SUPERFAMILY L domain-like 5 83 - -
Sebi38g00183 323 Pfam Protein kinase domain 187 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi38g00183 Sebi-Chr38 2623749 2626987 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi38g00183 189 312 Receptor kinase-like Gene Family AT3G47110 37.903 4.06e-21 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Sebi38g00183 Pkinase 5e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi38g00183 - - lja:Lj4g3v2002960.1 252.292