Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi38g00139 ATGGGATCCTCCTTCAGTTGCTGCGGCTCAGAGAAGGTCGAAGAAGTGCCAACATCATTTGGTGCAGTTAACAATTCGTGGAGAATTTTCACATACAAGGAGTTGCATGCAGCTACCAATGGGTTCAGTGAAGATAATAAGCTTGGTGAAGGTGGTTTTGGAAGTGTTTATTGGGGAAGAACCAGTGATGGCCTCCAGATAGCGGTGAAGAAACTGAAAGCAATGAACTCAAAGGCAGAGATGGAATTTGCAGTAGAAGTTGAAGTTCTTGGAAGGGTTAGGCACAAAAATTTACTGGGTCTTAGAGGCTATTGTGTTGGCGATGATCAAAGGCTTATAGTCTATGATTACATGCCAAATCTCAGCCTGCTTTCTCATCTACATGGCCAGTTTGCTGTTGAAGTGCAACTCAACTGGCAAAGGAGAATGAAGATTGCAATTGGCTCTGCAGAAGGCCTTCTGTTCAGGGATCTGGTTGATCCAAAGCTAAGAGGGAACTTTGATGAAAATCAAGTCAAACAAGCAATCAATGTGGCTGCTCTTTGTGTGCAAAGTGAGCCTGAGAAGCGACCTAACATGATGCAAGTGGTTAGCCTTCTCAAAGGATCTGAACCTGATGGGAAAGTGACCAAGATGAGGATAGATAGTATCAAATATAGTGAAGAACTTATGGCACTTGATCAACCTAGTGATGATGATTATGATGGAACCACTAGCTATGGTGTTTTTAGTGCCATTGAAGTCCAAAAGATGAATGACCCTTACAAGCGTGGTGGTAACAAGAAAGTGGGCTAA 795 0.4302 MGSSFSCCGSEKVEEVPTSFGAVNNSWRIFTYKELHAATNGFSEDNKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCVGDDQRLIVYDYMPNLSLLSHLHGQFAVEVQLNWQRRMKIAIGSAEGLLFRDLVDPKLRGNFDENQVKQAINVAALCVQSEPEKRPNMMQVVSLLKGSEPDGKVTKMRIDSIKYSEELMALDQPSDDDYDGTTSYGVFSAIEVQKMNDPYKRGGNKKVG 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi38g00139 264 Pfam Protein tyrosine and serine/threonine kinase 45 154 IPR001245 GO:0004672|GO:0006468
Sebi38g00139 264 PANTHER OS01G0253100 PROTEIN 156 205 - -
Sebi38g00139 264 Gene3D Transferase(Phosphotransferase) domain 1 154 218 - -
Sebi38g00139 264 ProSiteProfiles Protein kinase domain profile. 42 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi38g00139 264 Gene3D Phosphorylase Kinase; domain 1 14 117 - -
Sebi38g00139 264 ProSitePatterns Protein kinases ATP-binding region signature. 48 71 IPR017441 GO:0005524
Sebi38g00139 264 SUPERFAMILY Protein kinase-like (PK-like) 24 155 IPR011009 -
Sebi38g00139 264 FunFam PTI1-like tyrosine-protein kinase At3g15890 14 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi38g00139 Sebi-Chr38 1934528 1936101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi38g00139 30 155 Trihelix Transcription Factor Family AT1G70460 50.794 1.86e-37 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Sebi38g00139 PK_Tyr_Ser-Thr 2.8e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi38g00139 - - gmx:100787687 307.375