Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi38g00127 ATGGGGTCTGAAAAAAACGTGGGAAAGTATCGGCTTGGAAGGACAATTGGAGAAGGCACATTCTCTAAGGTTAAGCTGGCTGTGAATGGCAATAATGGTGAGAAGGTTGCAATCAAAGTCATTGATAAGCATATGGTCATGGAAAGCAATCTTAAGAATCAGGCAAAACCCCATCTTTGTCCTCCTTTTTCCTTCACCAACTTGTTATTTACTTTTTTTAACCAATACAAAGGACACCCACACCACATATTTCAGGTCCAAAGAGAGATTAGAACAATGAAGCTTCTGCATCATCCCAATATTGTCAGAATTCACGAGGTTATTGGCACAAAAACTAAGATATACATTGTGATGGAATATGTATCAGGAGGCCATCTATTGGACAAGCTGTCCTATTCCAAGAAGTTGAATGAATGTGAGGCCAGAAAAATCTTCCAGCAACTTATTGATGCTGTGGACTACTGCCACAACAGAGGAGTTTATCATCGAGATCTCAAGCCAGAAAACTTGCTACTTGACAGCAAGGGAAATCTCAAAGTGTCTGATTTTGGATTAAGTGCACTTAAAAAGCCTAATGATGTCTTAAACACACGGTGTGGATCCCCATGCTATGTGGCACCTGAGCTGCTAATGAGCAAAGGGTATGAAGGAGCAGCTGCTGATGTATGGTCATGTGGGGTGATCCTTTATGAGTTACTTGCGGGTTTTCTACCTTTTGATGACCAGAACTTGATGAGCTTGTATCATAAGATATGCAGAGCAGAATACATATGTCCACCATGGTTTACTCAAAGTCAAAAGAAACTAATTACCAAAATACTTGAACCACGTCCTGCAAAGCGGATAACTATGCCAGATATCATTGAAGATGAGTGGTTTCAAGCAGATTATAGTCCTACTTGTGGTTCTGAATTGGATCAGATTATTAACTTGGATGATGATAGTGTGGCTTTCGATTCAATTGAGGATCACAAAAAGCAGAGAACAAGGCTTGGATCGACACACAATATACTTGAAACCATAGAAAAAATAGAAGCTGCTGCAACAGATGTGAGACTGTCAGTAGAGAAAATGAACAACTTTAAGATAAAAATGCAGCCAAAACAGATAATGAAAAGGTCTTCTAGATCATACTTTGATCTATCAGCCCAGGAAGTTCAATTCTTTATGTTTGGCAACTGTCAGGTGATAGAAGTTTCTCCAACTCATTGTGTTGTAGAAATATCAAAATCTACAGGAGATCTAAGAATGTACAACCAATTTTGTGAAAGTCTATCAAGTCTGCTGAAACAAAAATCTCGTATGTCACCACAAAGTCAAGATTCTGTGGATCAGTGCGACGTTGGCATAAAAATGCAAGAAGCTGAATGCTATGAAGAGCCAAATAATGAAGATAGTGAGAAGGTCTTTGTTGGCTATAAATCTGCTTGA 1431 0.3899 MGSEKNVGKYRLGRTIGEGTFSKVKLAVNGNNGEKVAIKVIDKHMVMESNLKNQAKPHLCPPFSFTNLLFTFFNQYKGHPHHIFQVQREIRTMKLLHHPNIVRIHEVIGTKTKIYIVMEYVSGGHLLDKLSYSKKLNECEARKIFQQLIDAVDYCHNRGVYHRDLKPENLLLDSKGNLKVSDFGLSALKKPNDVLNTRCGSPCYVAPELLMSKGYEGAAADVWSCGVILYELLAGFLPFDDQNLMSLYHKICRAEYICPPWFTQSQKKLITKILEPRPAKRITMPDIIEDEWFQADYSPTCGSELDQIINLDDDSVAFDSIEDHKKQRTRLGSTHNILETIEKIEAAATDVRLSVEKMNNFKIKMQPKQIMKRSSRSYFDLSAQEVQFFMFGNCQVIEVSPTHCVVEISKSTGDLRMYNQFCESLSSLLKQKSRMSPQSQDSVDQCDVGIKMQEAECYEEPNNEDSEKVFVGYKSA 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi38g00127 476 ProSitePatterns Serine/Threonine protein kinases active-site signature. 160 172 IPR008271 GO:0004672|GO:0006468
Sebi38g00127 476 Gene3D Phosphorylase Kinase; domain 1 1 59 - -
Sebi38g00127 476 SMART serkin_6 10 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi38g00127 476 Pfam Protein kinase domain 85 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi38g00127 476 Gene3D Kinase associated domain 1, KA1 312 432 - -
Sebi38g00127 476 ProSiteProfiles Protein kinase domain profile. 10 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi38g00127 476 SUPERFAMILY Protein kinase-like (PK-like) 7 294 IPR011009 -
Sebi38g00127 476 Gene3D Transferase(Phosphotransferase) domain 1 126 311 - -
Sebi38g00127 476 Gene3D Phosphorylase Kinase; domain 1 72 125 - -
Sebi38g00127 476 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 8 424 - -
Sebi38g00127 476 ProSitePatterns Protein kinases ATP-binding region signature. 16 39 IPR017441 GO:0005524
Sebi38g00127 476 FunFam Non-specific serine/threonine protein kinase 121 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi38g00127 Sebi-Chr38 1796839 1799552 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi38g00127 118 429 CBL-interacting serine-threonine protein kinases AT5G57630 56.805 3.45e-124 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Sebi38g00127 Pkinase 5.7e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi38g00127 - - gmx:100786097 659.448