LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi38g00118	ATGCAGAGGCCAACGACGGATGCAATTAGTATGGGGAAAAGAGCCCTGGAGAGTGGAGAAGATGACCAGCCTGAAAGAAAGAGGCCCGCTCTTGCCAGTGTAATTGTGGAAGCTCTCAAGGTGGACAGTTTGCAGAAGCTTTGCTCATCTTTAGAACCTATTCTTCGTAGAGTTGTTCTAAATTGGTTTAATAATACTGGTGTGAAACAGGTGAGTGAAGAAGTGGAGCGGGCTTTGGCAAAGTTAGGTCCTGCAAGACTTACTGGAAGTTTAAATTCCAGGTCTTCTCCCCCGAAAATGATTGAAGGTCCTGATGGTAGAAACTTGCGGCTGCAATTTAGGTCCCGGCTATCTCTTCCCCTATTCACAGGAGGAAAAGTGGAAGGCGAGCAGGGGGCTCTCATTCATGTTGTTCTGATTGATGCCAATACTGGAAATGTTGTAACATCTGGACCTGAATCCTGTGTAAAACTTGATGTTGTTGTCCTTGAAGGCGATTTTAACAATGAAGATGATGAAGATTGGACTAGAGAAGACTTTGAAAGCCATGTAGTTAAAGAACGCGAAGGAAAGAGACCTTTGTTGACTGGGGAGCTGCAAGTGACACTCAAGGAAGGAGTTGGAACATTGGGGGAACTGACATTTACAGATAATTCAAGCTGGATAAGGAGCCGTAAATTCAGGCTTGGCCTGAAGGTTGCATCAGGATTTTGTGAGTCTGTACGCATTCGTGAAGCTAAGACAGTGGCTTTCACAGTTAAAGATCATAGAGGAGAATTGTGGAGATTGGAGAAGATAGGCAAGGATGGGTCATTTCACAAGAAGCTGAATAATGCAGGAATATTCACAGTTGAAGATTTTCTTCGGCTTGTGGTTAAAGATCAACAAAAATTGCGGAATATCCTTGGGAGTGGTATGTCAAACAAGATGTGGGAGGCTCTCTTAGAGCATGCAAAGACATGTGTTCTAGGAGGGAAGCTCTATGTTTATTATCCAGAAGATTCAAGAAATGTTGGTGTTATTTTTAACCACATCTATGAGCTGCGCGGCCTTATAACTGGAGAACAATTCTTTTCTGCTGATTCTCTCACTGATAGCCAGAAGGTTTATGTAGATTCATTGGTGAAGAAGGCATATGACAATTGGGAACAGGTTGTAGAGTATGATGGCAAATCACTCGTGAATGTGAATCAAAATAATAGCTCTGTTGAATCTGAAAATGAACTTCCCGTTGAGTCAATTGATTATGGTAGTGGTTTAGATCATCAACTGCAACTGCCAACCCTCCCAGTTTCCGTTCCTTCTGAACAGCAAATAAATTCAGGGATGCCAGTTGGAGGTTATAACAATAATATGGTAACAAGATACCCAACCCAGTCATTAATCACAAACTCCAGTTCCCGGAGTCAGTTTGATGGCTCATTGTATCTGTCTAATGACCAATTAATAAGCAATGTTCACCAACCCCAAAGCACTAGAAATGATAATGGCACAGTTGGGTTAGCTCTCGGCCCTCCTCAATCATCGACATCAGGGTTCCATGCTGGTAGCTCTTCTATTCAGCAGTCTACCTTAAATCCTTTTGATGATTGGTCACACAGCAGGGACAAGGGGGTTGATGAATTCTTTTCAGAAGAAGAAATCCGCCTTAGAAGTCATGAGATGCTAGAGAATGAAGACATGCAGCACTTGCTTCGCCTCTTCAGCATGGGAGGTCATGCCTCCATGAATGCTGAGGATGGCTATTCATACCCATCATTCATGCAATCTCCGATGCCAAACTTTGATGAGGATCGCTCTCGTCCAGGCAGAGCTGTTGTGGGATGGCTGAAGATCAAGGCAGCAATGAGGTGGGGCTTCTTTATCAGGAAGATAGCAGCTGAGAGGCGGGCACAGATAGAGGAGTTAGATGAATAG	1917	0.4371	MQRPTTDAISMGKRALESGEDDQPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVLNWFNNTGVKQVSEEVERALAKLGPARLTGSLNSRSSPPKMIEGPDGRNLRLQFRSRLSLPLFTGGKVEGEQGALIHVVLIDANTGNVVTSGPESCVKLDVVVLEGDFNNEDDEDWTREDFESHVVKEREGKRPLLTGELQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVASGFCESVRIREAKTVAFTVKDHRGELWRLEKIGKDGSFHKKLNNAGIFTVEDFLRLVVKDQQKLRNILGSGMSNKMWEALLEHAKTCVLGGKLYVYYPEDSRNVGVIFNHIYELRGLITGEQFFSADSLTDSQKVYVDSLVKKAYDNWEQVVEYDGKSLVNVNQNNSSVESENELPVESIDYGSGLDHQLQLPTLPVSVPSEQQINSGMPVGGYNNNMVTRYPTQSLITNSSSRSQFDGSLYLSNDQLISNVHQPQSTRNDNGTVGLALGPPQSSTSGFHAGSSSIQQSTLNPFDDWSHSRDKGVDEFFSEEEIRLRSHEMLENEDMQHLLRLFSMGGHASMNAEDGYSYPSFMQSPMPNFDEDRSRPGRAVVGWLKIKAAMRWGFFIRKIAAERRAQIEELDE	638

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi38g00118	638	Pfam	Calmodulin binding protein central domain	259	321	IPR046830	-
	Sebi38g00118	638	MobiDBLite	consensus disorder prediction	488	529	-	-
	Sebi38g00118	638	Pfam	Calmodulin binding protein C-terminal domain	326	388	IPR046829	-
	Sebi38g00118	638	PANTHER	OS02G0177800 PROTEIN	11	561	IPR012416	GO:0005516
	Sebi38g00118	638	Pfam	Calmodulin binding protein-like N-terminal domain	109	256	IPR046831	-
	Sebi38g00118	638	MobiDBLite	consensus disorder prediction	1	27	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi38g00118	Sebi-Chr38	1695410	1702295	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sebi38g00118	9	633	Calmodulin-binding Proteins	AT5G57580	65.023	0.0	825

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi38g00118	-		-	cam:101488801	1083.17