Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi38g00108 ATGTCACCCTCTCCACCACAAGAATTCATCTTCCGCTCCAAACTCCCCGACATTCCCATCCCCACTCACCTTCCATTACACTCTTACTGTTTCCAAAACCTCTCCAACTTTCAACACCGTCCATGCCTCATCGACGGCGATACCGGCGAGACCCTCACCTACGCCGACGTCCACCTCACCTCCCGAAAAGTCGCCGCCGGCCTCCACTCCATCGGCATCCGTAAAGGTGACGTCATCATGCTCGTCCTCCGCAACTGTTCCCAATTCGCCCTCGCCTTCCTCGGAGCATCCTTCGCCGGCGCCGCCATCACCACCGCAAATCCGTTCTACACGGCGGCAGAGCTCGCCAAGCAAGCAACAGCAACCAAGACCAAACTCATCATAACACAGGCAGCGTTCGTAGAGAAAATCAAGGATTTCTCGGGAAACACTGATATCAAAGTGATATGCATTGATCCTTCAGAAAACAAGGACGTTCTGCATTTCTCTGTTTTAACAAACGCTGACGAAAACGAAGCGCCTGTTGTGGAAATCAGTCCAGACGACGTCGTTGCGCTTCCGTTTTCTTCCGGCACGTCAGGGCTTCCTAAAGGTGTGATGTTAACGCACAGAAACTTGGTGACGACGATTGCGCAGTTAGTTGACGGCGAAAATCCGCACCAGTATACTCACTCAGAGGATGTGCTTCTGTGTGTGCTTCCTATGTTTCATATCTATGCGCTTAACTCCATTTTGCTGTGTGGGATTCGTGCTGGTGCGGCAGTGTTGACTGTGCAGAAGTTTGAGATTACGACGCTGTTGGAGCTGATTCAGAAATACAAGGTGACGGTTGCGTCGGTTGTGCCACCTATCGTTTTGGCGTTGGTTAAGAGCGGGGAATCTCATCGATACGACTTGTCGTCTATTCGGGTGATGATAACTGGTGCCGCACCTATGGGAATGGAACTGGAAGAAGCTGTGAAAGCAAGGCTACCAAAAGCCATACTTGGACAGGGATACGGGATGACAGAGGCAGGGCCATTGGCCATTAGCTTGGCATTTGCGAAGGAGCCATTCAAGACAAAAGCAGGTGCTTGCGGGACAGTCGTCAGAAACGCTGAGATGAAAATCGTGGACACGGAGACAGGTGCTTCCCTTCCAAGAAACAAAGCGGGTGAAATTTGCATTAGAGGCACAAAGAATATGAAAGGATATTTAAATGACCCAGAGGCCACAGAAAGAACTATAGACAAAGAAGGATGGTTACATACAGGTGATATTGGTGTCATCGACGATGATGATGAACTCTTCATTGTTGATCGATTAAAAGAGCTTATCAAATACAAAGGATTCCAAGTAGCTCCAGCTGAGCTCGAAGCGATGTTGATTGCCCACCCAAACATCTCTGATGCTGCCGTTGTACCCTTGAAAGATGAAGCTGCCGGAGAAGTCCCAGTTGCATTTGTCGTGAGATCAAATGGTTCTAAGATCACCGAGGATGAAATCAAGCAATACATTTCACAACAGGTGGTATTTTACAAGAGAATCAACAGAGTTTTCTTCACGGACACTATTCCTAAAGCAGCCTCAGGCAAAATTCTACGAAAGGAATTAACTGCAAGGCTTAACCAAGGTTTGGTGGCCACTTAG 1629 0.4868 MSPSPPQEFIFRSKLPDIPIPTHLPLHSYCFQNLSNFQHRPCLIDGDTGETLTYADVHLTSRKVAAGLHSIGIRKGDVIMLVLRNCSQFALAFLGASFAGAAITTANPFYTAAELAKQATATKTKLIITQAAFVEKIKDFSGNTDIKVICIDPSENKDVLHFSVLTNADENEAPVVEISPDDVVALPFSSGTSGLPKGVMLTHRNLVTTIAQLVDGENPHQYTHSEDVLLCVLPMFHIYALNSILLCGIRAGAAVLTVQKFEITTLLELIQKYKVTVASVVPPIVLALVKSGESHRYDLSSIRVMITGAAPMGMELEEAVKARLPKAILGQGYGMTEAGPLAISLAFAKEPFKTKAGACGTVVRNAEMKIVDTETGASLPRNKAGEICIRGTKNMKGYLNDPEATERTIDKEGWLHTGDIGVIDDDDELFIVDRLKELIKYKGFQVAPAELEAMLIAHPNISDAAVVPLKDEAAGEVPVAFVVRSNGSKITEDEIKQYISQQVVFYKRINRVFFTDTIPKAASGKILRKELTARLNQGLVAT 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi38g00108 542 Gene3D - 436 540 IPR045851 -
Sebi38g00108 542 FunFam Long-chain-fatty-acid--CoA ligase FadD 12 436 - -
Sebi38g00108 542 FunFam 4-coumarate--CoA ligase 2 437 538 - -
Sebi38g00108 542 CDD 4CL 20 531 - -
Sebi38g00108 542 Pfam AMP-binding enzyme 34 441 IPR000873 -
Sebi38g00108 542 SUPERFAMILY Acetyl-CoA synthetase-like 14 537 - -
Sebi38g00108 542 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 532 - -
Sebi38g00108 542 Gene3D - 5 435 IPR042099 -
Sebi38g00108 542 ProSitePatterns Putative AMP-binding domain signature. 186 197 IPR020845 -
Sebi38g00108 542 Pfam AMP-binding enzyme C-terminal domain 450 525 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi38g00108 Sebi-Chr38 1601143 1607295 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi38g00108 8 503 Monolignol Biosynthesis Gene Families AT1G51680 66.468 0.0 672