Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi38g00096 ATGATGAACAGTTTTGACCCCCAAAGACTAGCACAAGACTGTTCCTTGAAACGGAGATGGCAGCAGGACAGAAGACAGGGTAGTGCAGTACCTTCTTCTTCTACTTCTAATTTGGGTTTGTTGTATGGCAACAGATTCCAAGGGTTCCCTGTCCTTGAGGATGATGATCCTGTGTCCACTGTAGTCCCTGCAGTGACGGTGGTGCTTGAGGGCCGTTCGATCTGCCAACGCATCAGCCTCCATAACCACGCTAGCTATCAAAGTCTTGCTAAGGCACTCCGCCAGATGTTTGTGGAGGGAGGAGAGATCAGTACTGATGATGATGATGATAAGCTTGATCTGTCAAATGCAATTCCTGGTCACCTTATTGCCTATGAAGACATGGAGAATGATCTCCTTCTAGCCGGTGACCTTACCTGGAAGGATTTTGTACGTGTGGCAAAGAGGATTCGGATACTTCCAGTCAAAGGGAACTCAAGGAGAGGTATAGTACAAGAGGGGCGGGCATAA 510 0.4804 MMNSFDPQRLAQDCSLKRRWQQDRRQGSAVPSSSTSNLGLLYGNRFQGFPVLEDDDPVSTVVPAVTVVLEGRSICQRISLHNHASYQSLAKALRQMFVEGGEISTDDDDDKLDLSNAIPGHLIAYEDMENDLLLAGDLTWKDFVRVAKRIRILPVKGNSRRGIVQEGRA 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi38g00096 169 Pfam AUX/IAA family 63 153 IPR033389 -
Sebi38g00096 169 ProSiteProfiles PB1 domain profile. 62 157 IPR000270 GO:0005515
Sebi38g00096 169 Gene3D - 59 164 - -
Sebi38g00096 169 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 64 154 IPR003311 GO:0005634|GO:0006355
Sebi38g00096 169 SUPERFAMILY CAD & PB1 domains 75 152 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi38g00096 65 154 B3 DNA Binding Superfamily AT2G46530 30.000 1.21e-06 45.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Sebi38g00096 AUX_IAA 7.2e-14 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi38g00096 - - cit:102608997 207.608