Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi38g00078 ATGGAGGCTCAACCAGCTAAACGCAGACGTGTTTACTCTTTGGAACCAAACAAAATAGTAATGCAATCCATTTTTGCTAGAAATTATTTGAACTATTTAGTTCCAGCCTTGATGAAGATAAAGGCAAAGAGTTCTGCAGAAGATAATAGCAGGCATTGTGACATTAAGAATGTTAAGTATGAAGTTGACATGGCAATGGTGTTCTCAGCACAAGGCTTTGCATGGAGTAATGGCCTTAAAGTCAAGCTTGAAAGAGATCATGGCAATGTAGCTACAAGCACTACTAGCTTTCTGGCTAGTCATGAAGGTTCATCAAGGATTTATGACCACCAAAATGAAGTTGTCACACAGGATTATTTCTCTTCAAACCCTAGAACAAAGTCTCAATCAGACATTTTGAAAAAAGATTTAGCCAGAGAAGATAATGAAGATGAGGACAAAATGAAGAGCTTGAGAATGTTAATACCTGGAGGAGAAGAAATGTGTGATGAACAAATGGTTGCTGAACTAGAGAGTTACATAAGATGTTTGCAAATGCAGGTGAATGTTCTTCAATGCCTACTAGCTGAGCCATAA 576 0.3785 MEAQPAKRRRVYSLEPNKIVMQSIFARNYLNYLVPALMKIKAKSSAEDNSRHCDIKNVKYEVDMAMVFSAQGFAWSNGLKVKLERDHGNVATSTTSFLASHEGSSRIYDHQNEVVTQDYFSSNPRTKSQSDILKKDLAREDNEDEDKMKSLRMLIPGGEEMCDEQMVAELESYIRCLQMQVNVLQCLLAEP 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi38g00078 191 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 21 188 IPR044660 GO:0006355
Sebi38g00078 191 CDD bHLH_AtIBH1_like 133 188 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi38g00078 Sebi-Chr38 1057113 1057688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi38g00078 7 188 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 30.769 4.44e-20 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi38g00078 - - aprc:113852314 227.639