Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi38g00072 ATGACAGTAACCTTCAAAGGCTGTTACACCGTGAGGCCTATGGAGCCAACATGGTGCGGTCGCTTACCTTTATCTGAATGGGATCAAATAGGCACCATAACACACGTCAACACTATCTACTTCTACCGCCCCTCACAAAATTGGCTTTTTTCCACCATTGCTACCACTTTAAAAGACTCCTTAAGCCGAGTCCTAGTGCCGTTTTATACACTAGCTGGTCGTTTACACTGGATAGGCAATGGTCGTTTTGAGCTCGAGTGCAATGCCATGGGTGTTCGTTTCACTGAAGCAGAGTCCTCATTAACATTAGAAGATCTCCATAACTTTTCACCCTCTTCCGATGAGTACCAATACCTTATCCCCAATGTTGAATATACCCTCTCAATTCATGAGTTACCCTTGGTTCTGGTTCAGCTCACGAGGTTCAAATGTGGTGGAATTAGCATTGGCCTCAAAATCTCACACGCGATTGCGGATGGACCAAGTGCCCTGCATTTCATTTCTGAGTGGGCAAGGCTTGCAAGAGGTGAGCCTTTGCAAACGACGCCGTTTCATGATCGGAAAGTGTTGCGTGGTGGAGAGCCTCCACTGGTGCCTCAACCACCATACCATGACAAATGGGAGTTCAATCTCCCTCCCCTGTTGCTAGGAGAAACAGAGGAAATAAGGAAGAAGAAAACCACTTTAGCTATGATCAAATTGAGCAAAAACCAAGTTGAGAAATTGAGAAAGACAGCAAATGAGAGTTGGCATGGACCTAGCAATGGGCGTGGTTACACGCGCTATGAGACTGTGACTGGACATATATGGAGAAGTGCATGCAAGGCAAGGGGACACAAACAGGACCAACCAACGGTTGTAGGTATTTCTGTTGATTCAAGGTGTCGTATGCAGCCTCCATTGCCAAAAGGGTATTTTGGGAATGCTACTTTTGATGTGGTTGCTACTAGTCTCGCCGGTGATTTGATGTCAAAGCCATTGGGGTATGCGTCGAGTAGGATAAGGGAAGCAGTTGAGAAGGCAACGGATGAGTATGTGAGGTCAGGGATTGAGTTCTTCAAGAAGAAGGAGGATTTGACTATGTTTCAAGATCTTCATGCAAAAATAAGGACTGAGGCAAGGCCTTTCTATGGGAACCCAAATTTGGGGGTGATTAGTTGGTTGACGTTACCGATCTATGGGGTTGATTTTGGGTGGGGGAAGGAGGTTTACATGGGTCCAGGAACACATGACTTAGATGGAGATTCTTTGCTTCTTCCAGGTCCAGATGGGGATGGATCTGTGCTGGTTGCTATTTGTCTGCTAGAGAACCACATGGATGCCTTTAAGGAACATATTTATGAAGACATTATGTAA 1356 0.4572 MTVTFKGCYTVRPMEPTWCGRLPLSEWDQIGTITHVNTIYFYRPSQNWLFSTIATTLKDSLSRVLVPFYTLAGRLHWIGNGRFELECNAMGVRFTEAESSLTLEDLHNFSPSSDEYQYLIPNVEYTLSIHELPLVLVQLTRFKCGGISIGLKISHAIADGPSALHFISEWARLARGEPLQTTPFHDRKVLRGGEPPLVPQPPYHDKWEFNLPPLLLGETEEIRKKKTTLAMIKLSKNQVEKLRKTANESWHGPSNGRGYTRYETVTGHIWRSACKARGHKQDQPTVVGISVDSRCRMQPPLPKGYFGNATFDVVATSLAGDLMSKPLGYASSRIREAVEKATDEYVRSGIEFFKKKEDLTMFQDLHAKIRTEARPFYGNPNLGVISWLTLPIYGVDFGWGKEVYMGPGTHDLDGDSLLLPGPDGDGSVLVAICLLENHMDAFKEHIYEDIM 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi38g00072 451 Gene3D - 1 207 IPR023213 -
Sebi38g00072 451 Pfam Transferase family 1 448 - -
Sebi38g00072 451 Gene3D - 217 449 IPR023213 -
Sebi38g00072 451 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 11 447 - -
Sebi38g00072 451 SUPERFAMILY CoA-dependent acyltransferases 55 182 - -
Sebi38g00072 451 FunFam Tryptamine hydroxycinnamoyl transferase 216 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi38g00072 Sebi-Chr38 992671 994026 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi38g00072 1 448 Monolignol Biosynthesis Gene Families AT5G48930 39.111 9.35e-107 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi38g00072 K13065 - gmx:100777007 646.736