Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi38g00055 ATGTCTTCGTGTTTGAGTGGAACGGGAGGAAGAACGTATGGATTTGATTTAGATTTTGTTAAATCTCCATCTTCATGGAGTCGAACTTCACAGACATCTTCTTCTCCTTCCTCAACCATCTCTGAATCCAGCAATTCACAATTGGCAATCTCCACCAGAAAACCCAGAACCCCGAGAAAGCGACCTAACCAAACCTACAACGAAGCTGCCGCACTCCTTTCCACAGCATACCCGAACCTGTTCTCTACGAAGAATCTCAAAACACCACCGGCCAATAAATTTTCCAAACCAGAGGCATCGGAAACAGAAGATTTCGACGCCGAATCGATTCTCGATGAGGAAATTGAGGAAGGGATCGATAGCATCATGGGGAGTAGGGTTGAGGAGGACTCCAATGGCGCATCTAGTCACCATCCTTGGATTGATTTTGGCGGGAAATTCGATTTCCGGCTTGGATTGCAGAGAGCAGGAGTGAGGGCTCTTCGCCACGTGGATGATGGCAATTGGTGGAATTTTCCGGCAGTTGATATCCTTCAAATCTCGCCCAAAATCAACGGTGGCGTGGAATTGAACGAAGCGGAATTGCCCAAATCGAACCCTGGTTTGATGTTGAAATTGAATTTCGACGATGTTCGGAATGCTTGGTCTGACCGGGGCTCGCCGTTCGCCGACGATAGCCCCGCCTCCGACGTACCGGGAAGTGACGTCACTGCGCGACTGTCGCAAATTGATTTGTTATGGGACAATGGAGGAGTGAGGGAAGCTAGCGTGCTGCGCTACAAAGAAAAGCGGCGTACACGCCTCTTCTCTAAGAAGATCAGATACCAGGTCAGGAAAGTCAACGCAGATCGACGGCCCAGAATGAAGGGGCGATTTGTTAGGAGGCCGAATTCTAGCTCAAATGCACACAGATGA 915 0.4929 MSSCLSGTGGRTYGFDLDFVKSPSSWSRTSQTSSSPSSTISESSNSQLAISTRKPRTPRKRPNQTYNEAAALLSTAYPNLFSTKNLKTPPANKFSKPEASETEDFDAESILDEEIEEGIDSIMGSRVEEDSNGASSHHPWIDFGGKFDFRLGLQRAGVRALRHVDDGNWWNFPAVDILQISPKINGGVELNEAELPKSNPGLMLKLNFDDVRNAWSDRGSPFADDSPASDVPGSDVTARLSQIDLLWDNGGVREASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFVRRPNSSSNAHR 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi38g00055 304 MobiDBLite consensus disorder prediction 24 63 - -
Sebi38g00055 304 MobiDBLite consensus disorder prediction 24 53 - -
Sebi38g00055 304 Pfam CCT motif 253 295 IPR010402 GO:0005515
Sebi38g00055 304 ProSiteProfiles CCT domain profile. 253 295 IPR010402 GO:0005515
Sebi38g00055 304 MobiDBLite consensus disorder prediction 83 106 - -
Sebi38g00055 304 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 1 298 - -
Sebi38g00055 304 MobiDBLite consensus disorder prediction 285 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi38g00055 Sebi-Chr38 738260 740792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi38g00055 202 295 C2C2-CO-like Transcription Factor Family AT1G25440 45.045 3.89e-20 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sebi38g00055 CCT 1.3e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi38g00055 - - zju:107419572 344.354