Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi38g00032 ATGAGAGGTCTGTCTTGCCGTGGCAATGTCTCAGGGAGCTGTCAGTTTTGTACTGATCTCAGCAATACTACTAGTAGTACATCTCTTTGGGGCTCTCAGAATAGCCAGATCACTGGAGTAAGATCAGATCAAAAGGAAATTCCTTATGGGCAGATTTTGAATGCTGCAAACTTGAGAGTTTTTACTTTGGCAGAACTGAAGGCAGCCACTAAGAATTTCAGAGATGACACTGTTTTAGGTGAGGGAGGTTTTGGTAGAGTATACAAAGGTTTTATTAAGGAGAGAGGTGAGGTAATGCCTATTGCTGTCAAGAAATTGATTTCTGGAAGTAGTTGGCAAGGAGCTGAGGAATGGCAGAAAGAGGTGAATTTTTTAGGAAGGCTTTCTCATCCCAATCTCATAAAGTTGTTAGGCTTCGGGCAAGAGGACAGTGAGCTGTTCCTGGTATATGAATTTATGCAACGGGGCAGCTTTGATAACCACCTATATGGAAGAGGTGCAAACATTCAGCCACTATCGTGGGACACAAGGCTAAAGACATACACAGCTAAGTTATCGGACTTTGGCTTAGCCAGATATGGTCCTTCTGGTGATGAGACTCACGTAACAACGCGGGTTATGGGAACAGGTGGCTATGCTGCTCCTGAATACGTTGCCACAGGTCACTTGTATGTAAAATCTGATGTGTATGGATTTGGGATTATTTTGGTGGAGATGCTAACTGCCAAGAAGATACGTGATATAATGCCCCTTGGTCAGCAAAAGTTCTTATTGGATTGGCTCAAATCAAATCTATTAAATAGAGGGAAAATGAGAAGGACTATGGATGCAAAGTTGGAAGGCAAGTATCCACCCAACTTAGCTTCACAAGTAGCTCAATTAACTCTCAAATGCCTCCAAGAAGACCCCAAAATCAGGCCATCAATGCAACAAGTTGTTGAAACATTGGAACAGATTGAAGCAGCCAATGACAAACCAGCTAACAATAACAATAGAAACCGTGCTCGGGCACTTCAACGACATGGCCAGCCAGATGATGGTTAA 1044 0.4291 MRGLSCRGNVSGSCQFCTDLSNTTSSTSLWGSQNSQITGVRSDQKEIPYGQILNAANLRVFTLAELKAATKNFRDDTVLGEGGFGRVYKGFIKERGEVMPIAVKKLISGSSWQGAEEWQKEVNFLGRLSHPNLIKLLGFGQEDSELFLVYEFMQRGSFDNHLYGRGANIQPLSWDTRLKTYTAKLSDFGLARYGPSGDETHVTTRVMGTGGYAAPEYVATGHLYVKSDVYGFGIILVEMLTAKKIRDIMPLGQQKFLLDWLKSNLLNRGKMRRTMDAKLEGKYPPNLASQVAQLTLKCLQEDPKIRPSMQQVVETLEQIEAANDKPANNNNRNRARALQRHGQPDDG 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi38g00032 347 PANTHER OS01G0588500 PROTEIN-RELATED 180 320 - -
Sebi38g00032 347 SUPERFAMILY Protein kinase-like (PK-like) 52 316 IPR011009 -
Sebi38g00032 347 ProSitePatterns Protein kinases ATP-binding region signature. 79 105 IPR017441 GO:0005524
Sebi38g00032 347 Gene3D Phosphorylase Kinase; domain 1 32 152 - -
Sebi38g00032 347 Pfam Protein kinase domain 182 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi38g00032 347 FunFam receptor-like protein kinase FERONIA 35 152 - -
Sebi38g00032 347 Gene3D Transferase(Phosphotransferase) domain 1 172 343 - -
Sebi38g00032 347 Pfam Protein tyrosine and serine/threonine kinase 77 165 IPR001245 GO:0004672|GO:0006468
Sebi38g00032 347 ProSiteProfiles Protein kinase domain profile. 73 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi38g00032 347 MobiDBLite consensus disorder prediction 321 347 - -
Sebi38g00032 347 MobiDBLite consensus disorder prediction 321 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi38g00032 Sebi-Chr38 380694 382385 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi38g00032 51 324 Glycoside Hydrolase AT3G07070 37.013 6.94e-64 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Sebi38g00032 Pkinase 2.7e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi38g00032 - - gmx:100813304 428.713