Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi38g00016 ATGGGGGTGGTTTTGGCTCTGATGCTGCAGCTGGTGAAGCTCTGCATCATTGGCTTTGCTGTTGCAGCCCAAGGATCCAAAGGGTCCATCATATCTCCATCTCCAGTATTCCTTCCTGTCATTCCTCCAGAAACACTTGGTCCTATCAATCATGGAGAGTTAAGGGGAAGCAGTGCACCAAGCTTGCCATCAGATCCAGATGGGCTTGTTATTTCCCCATCTCCAGCAAACTTACATGTGTATCCTTCCCCTATTGAAACACCTGGTTCTTTACACCAAAGAGATTCATGGAGAACCATTTCCCCAAGCTCTCCAGCAGTACCAAATGGGTCAGTCTTTCACCCTCCAAATACATTACCACCTCCTGCATCAGCTCCAATTCCTCGGAAGAGTAAAGACATAGAACCATCCGTATCTCCAAGTTCAAGCCCTATAGCATTATCACCACCAAATGAAGTTGTTCCTTCACCATCAACAGTGCAAGGGAATATACCACCGTCTGTAAAAGCAACTCCACCACCTATTGTTAGGCCTCCCATCTCCACACCAACTGCTCCAGCTCCAGTTGCAATACCTTCTGGCAGATCACCAAAAATTTCACCGGTCAGCCAACCAGCTGAACATGGAAATTTGGCACCTAAAGCTGATGATAGGAATGCAAATAAGAGTCATACTGTAGAGCCAATTTCCCCAGCACCAATTGCAATACCTTCAACCAATTTTCCCAAAAATTCATCACAAAGCCAACCAACTGGACATGGAAGTTTTCCTCCTAAAGAGGGGACAAATGAAGCCCCTGTAGCAGTTAATTTGCCAAAAAAATCACCTGTAAGCCAGCCACCTGAGCATGGAAGCCAGCCACCAAATGTCCATCAAAGGAATGCAAATACAGGTCACACCTTGGAGCCCATTTCACCAGTTGCAATACCTCCTGCAACTGCAACTTCCAAAGAGAATTCAACAGTCAGCCAACCAACTCAACATGGAAGTATTCCACCTAATGTTCATAAAAAGAATACAAATGAAGGTCACACCCCTGGGCCAGTTTCACCAGAATCAGTTGCACCTCCACCATGGAAAGCAGAACATATCCCCCCAGTGGCCCATCCCATTTTCCCAACAATAACTCCATCCATATTATCTGCACCAGCCACGTCACCAAGAAGTGCATTTCCGGTAAATCCACCATTGGTCCATCCAATTGTTCCAGAAGTATCTCCATCAAAATTACCAGCATCTGTTCCCTCTCCCATGTCAACTCCTTCAAGAAGCATTAGTTGGAAAAGTGGTGGAGCACCAGTTGCTGCACCTTTGTACAAAACACCAAAACCACTTCCAGCTGTAATACATTCCCCTGATCAAGCTCCTGCTGCACAAAATGCAACGCAATTGCATCATGCTCCAGAGCCATTGACTTCATCCCCTAAATCTCCTTCCAATAAAGAAAATCATTTTCCTGCATTGTCACCTTCAATCTCATTTTATGAACATCATCACACGAGGAACGTGATTACCAGCCCTGCTCCTGCATCATCATATATGGTCTCTCCTCCCACTTCAAAACACCAAGATAGAGCAATTCCTCCCTCATTGTCGCCGGCAAGTGGACAAAAACATCATGTTCCATTACCAATGAACTCAGTACCATCTTTTCCTCCTAAAGTATCTCCATCTGGGTCTTCTGCCATGAGCCCTGAGATGCCCCTCCTACCTCAAATTCAAGCACTGCCACCCCCACCTCCTAATGAAGAGCTTGCTTCTGAAATTTCCACTGGAGTTTTCATGAAGCAAAGTCAAGTTCGAATTATGGGAGCCAATGCAGCAAACCAGCAACCTGAGAAAACTGTTGTCCTTATTGATTTGTTGCCACTTGGGGAAAAGTTTGATAATTCTACAGCCTTTTTGACTTCTGACAGATTTTGGCATAAAAAGGTTGTTATAAAAGCTTCCTACTTTGGAAACTATGATGTTTTATATGTGAGCTATCCAGGTTTACCTCCTTCTCCTCCTTTACCACCTTCAAGCATGAGCATGATAGATGGTGGCCCATTTTCCACTGATGACAATAATGGAACGACAATAAAGCCCCTTGGGGTTGACATACAGAAGAGGCAGCATAAAGGTGGACTCAGCAGAGGCATAATTGCCATTATTGCTGTTTCAGTTTTTCTAGCAGTTGTTTTATGTACAGCTGCCGCCTGGGTCTTGTTCAAATTCAGAGATCATGCTAGTCAGCCAGCATCAACCCCACGGCTTTCAACACCTTCTCTTATGAAAGCACCAGGTACTGCTCCTGTGTCATTAATTGGAGATGGAGGAGTTGGATCCATTTCTTCGTCATTTCGATCCAGCATTGCTGCTTATACAGGGTCAGCTAAGACTTTCAGTATGAATGACATTGAGAAAGCCACTGATAATTTTCATGCTTCAAGAATACTTGGAGAAGGTGGTTTTGGGCGTGTTTACAGTGGTATCCTTGGAGAAGGGACAAAAGTGGCGGTCAAGGTTCTAATGAGGGATGATCATCATGGTGATCGTGAATTCTTAGCTGAAGTTGAAATGCTTAATCGTCTTCACCACAGAAATTTGGTCAAGTTGATTGGTATATGCGCAGAGAATAGCTTCCGCTGCTTGGTTTATGAACTTGTTCCAAATGGCAGTGTGGAATTCCATTTACATGGAGTTGACAAGGAAAACTACAAACTTGATTGGGCTGCTCGGATGAAGATAGCTCTTGGTGCAGCTCGTGGTCTTGCTTATCTGCATGAAGATTCAAGTCCCCGTGTTATACATAGGGACTTCAAGTCTAGCAACATATTGTTGGAAGATGATTTTACACCAAAAGTATCTGATTTTGGATTGGCCCGGACAGCAACTGATGAGGAGAATAGACACATATCAACACGTGTCATGGGAACTTTTGGTCAAGTCAAATGA 2937 0.4433 MGVVLALMLQLVKLCIIGFAVAAQGSKGSIISPSPVFLPVIPPETLGPINHGELRGSSAPSLPSDPDGLVISPSPANLHVYPSPIETPGSLHQRDSWRTISPSSPAVPNGSVFHPPNTLPPPASAPIPRKSKDIEPSVSPSSSPIALSPPNEVVPSPSTVQGNIPPSVKATPPPIVRPPISTPTAPAPVAIPSGRSPKISPVSQPAEHGNLAPKADDRNANKSHTVEPISPAPIAIPSTNFPKNSSQSQPTGHGSFPPKEGTNEAPVAVNLPKKSPVSQPPEHGSQPPNVHQRNANTGHTLEPISPVAIPPATATSKENSTVSQPTQHGSIPPNVHKKNTNEGHTPGPVSPESVAPPPWKAEHIPPVAHPIFPTITPSILSAPATSPRSAFPVNPPLVHPIVPEVSPSKLPASVPSPMSTPSRSISWKSGGAPVAAPLYKTPKPLPAVIHSPDQAPAAQNATQLHHAPEPLTSSPKSPSNKENHFPALSPSISFYEHHHTRNVITSPAPASSYMVSPPTSKHQDRAIPPSLSPASGQKHHVPLPMNSVPSFPPKVSPSGSSAMSPEMPLLPQIQALPPPPPNEELASEISTGVFMKQSQVRIMGANAANQQPEKTVVLIDLLPLGEKFDNSTAFLTSDRFWHKKVVIKASYFGNYDVLYVSYPGLPPSPPLPPSSMSMIDGGPFSTDDNNGTTIKPLGVDIQKRQHKGGLSRGIIAIIAVSVFLAVVLCTAAAWVLFKFRDHASQPASTPRLSTPSLMKAPGTAPVSLIGDGGVGSISSSFRSSIAAYTGSAKTFSMNDIEKATDNFHASRILGEGGFGRVYSGILGEGTKVAVKVLMRDDHHGDREFLAEVEMLNRLHHRNLVKLIGICAENSFRCLVYELVPNGSVEFHLHGVDKENYKLDWAARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEDDFTPKVSDFGLARTATDEENRHISTRVMGTFGQVK 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi38g00016 978 MobiDBLite consensus disorder prediction 507 526 - -
Sebi38g00016 978 SUPERFAMILY Protein kinase-like (PK-like) 787 974 IPR011009 -
Sebi38g00016 978 Pfam Protein tyrosine and serine/threonine kinase 809 964 IPR001245 GO:0004672|GO:0006468
Sebi38g00016 978 MobiDBLite consensus disorder prediction 455 487 - -
Sebi38g00016 978 ProSitePatterns Protein kinases ATP-binding region signature. 813 835 IPR017441 GO:0005524
Sebi38g00016 978 Gene3D Phosphorylase Kinase; domain 1 779 882 - -
Sebi38g00016 978 ProSitePatterns Serine/Threonine protein kinases active-site signature. 929 941 IPR008271 GO:0004672|GO:0006468
Sebi38g00016 978 Gene3D Transferase(Phosphotransferase) domain 1 883 977 - -
Sebi38g00016 978 MobiDBLite consensus disorder prediction 81 362 - -
Sebi38g00016 978 MobiDBLite consensus disorder prediction 507 540 - -
Sebi38g00016 978 MobiDBLite consensus disorder prediction 447 487 - -
Sebi38g00016 978 FunFam receptor-like serine/threonine-protein kinase ALE2 780 882 - -
Sebi38g00016 978 PANTHER OS01G0750732 PROTEIN 582 977 - -
Sebi38g00016 978 MobiDBLite consensus disorder prediction 312 347 - -
Sebi38g00016 978 MobiDBLite consensus disorder prediction 135 166 - -
Sebi38g00016 978 MobiDBLite consensus disorder prediction 284 301 - -
Sebi38g00016 978 MobiDBLite consensus disorder prediction 89 111 - -
Sebi38g00016 978 FunFam Protein kinase superfamily protein 883 957 - -
Sebi38g00016 978 MobiDBLite consensus disorder prediction 237 256 - -
Sebi38g00016 978 MobiDBLite consensus disorder prediction 167 186 - -
Sebi38g00016 978 ProSiteProfiles Protein kinase domain profile. 807 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi38g00016 Sebi-Chr38 200587 208377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi38g00016 584 977 Receptor kinase-like Gene Family AT5G56890 65.915 5.37e-159 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Sebi38g00016 PK_Tyr_Ser-Thr 1.8e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi38g00016 - - gmx:100816296 1301.96