Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi389g00001 ATGGAGGAAAAGGACATGCACGAAGAGAACAACGTGGCGCTACTCTTCAGTTCCGACGGTGGCGCCACGCTCAACGGCCTCCTCGAAGACGAATCCACCACAACCGCTGCCACGTCAGAGGAAGGATCGATGTCGGCGCTGACGTGTCCTGTGTTGGATGGGAACTGGCTTGTGAGGAAAGCGATGAGGAAGAGTAGCAAAGAGAGGGAAGTTGAAGAGAGGTGGGTTTGTTACTCGGAAGTGGTGGAGGAGAAGAAGGAGCTTATGGAGGAAGTTACGAGTTATTGTTGTGCCACAAGGGAGGATCCGTTGAGGAGAACGACGTCGTTTGGGTCGTTGTCGTTGAAGCTGGATCACGAGGGGATATTGAATGCTTGGTCTGATAAAGGCTCTCTTTATGTAGCAGAGGATGAGGCCCCACAGATTGTTCCTGATTTGTTCAATGCTCACCTTCTTCATAATGCATTTCCTCCCAATCATGTCACATGGGATGGTTGGGGGAGTGATGCTGTTGGGAACACATGGAAAGTTCCTGAAGATTGTGGAGCTAACAAGACGAAGGTGAAAGAAGAAATGGGTTGGAAGTTGGGGCAGAGAGAGGCTAGTGTGCTGAGATACAAGGAGAAGAGGCAAAGCAGGCTCTTTGCTAAGAGGATCCGTTATGAAGTTCGAAAGCTGAATGCTGAGAAGCGACCCAGGATGAAG 705 0.5035 MEEKDMHEENNVALLFSSDGGATLNGLLEDESTTTAATSEEGSMSALTCPVLDGNWLVRKAMRKSSKEREVEERWVCYSEVVEEKKELMEEVTSYCCATREDPLRRTTSFGSLSLKLDHEGILNAWSDKGSLYVAEDEAPQIVPDLFNAHLLHNAFPPNHVTWDGWGSDAVGNTWKVPEDCGANKTKVKEEMGWKLGQREASVLRYKEKRQSRLFAKRIRYEVRKLNAEKRPRMK 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi389g00001 235 ProSiteProfiles CCT domain profile. 199 235 IPR010402 GO:0005515
Sebi389g00001 235 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 8 235 - -
Sebi389g00001 235 Pfam CCT motif 199 235 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi389g00001 Sebi-Chr389 62989 64890 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi389g00001 112 235 C2C2-CO-like Transcription Factor Family AT1G73870 41.935 2.83e-17 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sebi389g00001 CCT 2.7e-13 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi389g00001 - - gmx:100798231 313.923