Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi388g00045 ATGGCGGAGTGTGCTCAAGTTGGCTTAATCATATTGAGCAAACAAGTCATGGCACAAGGGATGACCAATTTCATATTCATCTTCTACTCAAATGCAATCGCTTCCCTTCTTCTCCTTCCCACTTCCTTCCTTGTCCACAGATTTGAACGTCCTCCAATCACGTTTTCCACCCTTTGTGGATTTTTCTTACTTGGACTACTCGGTTATTTGGCGCAGGCTTTTGGGTACGCTGGGATTTACTACAGCTCAGCAACACTAAGCACATCCATGCTCAATCTTGTTCCTGGTTTTACTTTCATACTTGCCGTTGTTTTTAGAATGGAACAATTAGATTGGAGTAGCTCTAGCAGCCTAGCTAAATCATTGGGAACAGTAGTATCGATTGCTGGTGCATTTATTGTGACATTGTACAAGGGCCCTGCACTTTTGATGGGACTATCACCTGAAAACTCATCTCAGCAGCCAGTTTCCTCACAAGATTCTAATTGGATACTCGGAGGATTATTTCTTGCTGTTGACTGTGTGATGGCTTCAGCATATATTATTGTACAGGCTTCTATCCTTAAGAAATATCCAGCAGAGTTGATTGTTGTATTCTTTTATTGTTTCTTTGTGGCCATTCAATCTGCTGTGACCAGTTTGGTTGTGGAAAGAGACTTAAGTGCTTGGAGCTTGGAACCTAAGTTTAGGTTGCTTGCAGTTTTATACTCGGGAATCTTTGGCTCTGCATTTCAAGTTGGTGTTATTACTTGGTGTTTGCACCAGACAGGACCTGTTTTTGTTTCCATGTTCAAGCCTTTAGGAATCGTCATATCGGTTGTTATAGGTGTTCTCTTCCTTGGGGATGCATTCTATCTTGGAAGTCTGATTGGTGCTATTGTGATTGTTCTTGGGTTTTATTCTGTATTGTGGGGGAAATCCAAAGATATTGAAATGAGAAGCTTGGAATCAAGGGGCAAACAGACCCCGCTTTTGAAGGAAAACGGCAGTGAAGACATGTAA 1002 0.4172 MAECAQVGLIILSKQVMAQGMTNFIFIFYSNAIASLLLLPTSFLVHRFERPPITFSTLCGFFLLGLLGYLAQAFGYAGIYYSSATLSTSMLNLVPGFTFILAVVFRMEQLDWSSSSSLAKSLGTVVSIAGAFIVTLYKGPALLMGLSPENSSQQPVSSQDSNWILGGLFLAVDCVMASAYIIVQASILKKYPAELIVVFFYCFFVAIQSAVTSLVVERDLSAWSLEPKFRLLAVLYSGIFGSAFQVGVITWCLHQTGPVFVSMFKPLGIVISVVIGVLFLGDAFYLGSLIGAIVIVLGFYSVLWGKSKDIEMRSLESRGKQTPLLKENGSEDM 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi388g00045 333 Pfam EamA-like transporter family 166 303 IPR000620 GO:0016020
Sebi388g00045 333 Pfam EamA-like transporter family 11 135 IPR000620 GO:0016020
Sebi388g00045 333 SUPERFAMILY Multidrug resistance efflux transporter EmrE 224 307 - -
Sebi388g00045 333 SUPERFAMILY Multidrug resistance efflux transporter EmrE 32 138 - -
Sebi388g00045 333 PANTHER WAT1-RELATED PROTEIN 1 310 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi388g00045 Sebi-Chr388 722437 726375 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi388g00045 3 332 Nodulin-like Gene Family AT5G40240 43.155 2.46e-91 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi388g00045 - - gmx:100804932 533.487