Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi388g00044 ATGGAGGATTTGGGCATATTTTCAGTCATGTTGGCAATTGAGATGTTGGAAGTTACTGTCAACACTGTGAGCAAAGCAGCCATGAAGAGAGGCATGAATAACTTTGTATTTATCATGAAACGTACTCTTCCGCCACTCACATATTGGAGCATTGGCCTATTATTTGTTGCTGGCTTTTTCAGTTGCACTATTCAGATGCTCAAGTTTTTTGGCATAGCTTACAGCTCTCCTACTTTGGCCTCAGTAATGTCTGATTTAGTCCCCGCTTTTACCTTCATACTTGCTGTCTTCTGCAGGATGGAAAATTTTGACTATAAAGCTAACAGCACTCAGGTCAAGTCTTATGGCACATTGGTATCAATCACTGGGGCTTTGATAATTACTCTGTACAAAGGCCAGCCAATCATAAACAACCATCCTAATTTCCCTGAAAATCTTCTTTCATCTGAGCAATTTGACTGGATATTTGGGGGAGTGTTGCTTGCGGCTTTTAGCTGTATGCTCTCATTCCATCATATAGTTCTGACATGGTTAATCAGAGAGTACCCTGCAGAGCTTATGGTAGTACTTATTCGCAGCATGATAGTGTCTGTGCTATCTGTTCCAGCTGTGTTGATTTCAGAAAAAGACCCAAAAGCTTGGAGACTGGGACTTAATATGGAGTTGTTAGCTATTGGATGTTCAGCAGTTTTCACGGGCTGTTTTCGAAGTGTTATCCATATCTGGGCCATGAAGAAGAAGGGCCCTGTCTATGTGGCAATGTTTAAGCCACTTGAAATAGTCTTTGCAGTCCTAATGGGTATTGCTTTTCTTGGGGACTCACTCTATCTTGGAAGTGTGATTGGAGCAGCCGTTGTGGTTATTGGTTTTTATGCTGTTATTTGGGGAAAAACTGAAGAAGAGAAGGTGAAGGAAAACTGTAAAGTCGATGGCTTCGTATCAGACTCGCCCGAGGTACCTCTATTACAGAACAGAGGAATGGATAGACAATAA 993 0.4169 MEDLGIFSVMLAIEMLEVTVNTVSKAAMKRGMNNFVFIMKRTLPPLTYWSIGLLFVAGFFSCTIQMLKFFGIAYSSPTLASVMSDLVPAFTFILAVFCRMENFDYKANSTQVKSYGTLVSITGALIITLYKGQPIINNHPNFPENLLSSEQFDWIFGGVLLAAFSCMLSFHHIVLTWLIREYPAELMVVLIRSMIVSVLSVPAVLISEKDPKAWRLGLNMELLAIGCSAVFTGCFRSVIHIWAMKKKGPVYVAMFKPLEIVFAVLMGIAFLGDSLYLGSVIGAAVVVIGFYAVIWGKTEEEKVKENCKVDGFVSDSPEVPLLQNRGMDRQ 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi388g00044 330 Pfam EamA-like transporter family 159 294 IPR000620 GO:0016020
Sebi388g00044 330 PANTHER WAT1-RELATED PROTEIN 7 305 IPR030184 GO:0016020|GO:0022857
Sebi388g00044 330 SUPERFAMILY Multidrug resistance efflux transporter EmrE 38 129 - -
Sebi388g00044 330 SUPERFAMILY Multidrug resistance efflux transporter EmrE 221 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi388g00044 Sebi-Chr388 705059 706907 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi388g00044 8 330 Nodulin-like Gene Family AT3G28050 39.660 4.67e-74 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi388g00044 - - gmx:100500595 409.838