Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi388g00036 | ATGTTTCATCATCAGCTCCCATCTTCTTCTCCTATGCCAATTCCAACCCCAATGGACAGATCAAGTTCTTCAAGGTGGAAGCCCAGCATTGAGGTAGCACCAAATTGCCCTCGTTGCGCTTCCACCAACACCAAATTCTGTTACTACAACAACTACAGCCTGTCACAGCCTAGATACTTCTGCAAAGGCTGCAGGCGCTACTGGACCAAAGGTGGCTCCCTTCGGAACGTCCCTGTTGGTGGTGGCTGCCGCAAAAGCCGCCGCGGAAAATCCGCAAAGCACCCCAAAACTGAAGGTAGCTTCCATGGGAGTGATGATAGAGAGTCATCAATAGGTGATCAACACAACCAAACCAATGGCCATGTGTCTTGTGATATAGACATGGCTCTTGTGTTTGCCAAATTCTTGAACCAAGAGAAGAGTAATATTGGTGAGGAACAATTTGAGAGTGAGGCTACTAACAATGGGTCAACTTCTTCCAATGATGCAGTGATCCAGCCTCAGAAGAAGTCCTCTGATGAAGCAGTGGGGGACACACTGGAAGAATTGAGTTTGAGTGGGATTGATGAGCTGGAGGGATATTTTGGGGCAGGTGGTTGTGATGATGAAGATGTGGTCCAAGATGTTCTCTGGCCTCATGATGCTACCATGTCTTCTTCTGTTATGTGGCAAACACCATCCATGATGCAAACGCAGTTGGAGGACTTGGAGTTGGAGTTGGAGTACTCGTTGCCATTCAATGAGGATGGTCAATTATTACCGATTAGTTCAACTTCTTCTACCGTGAATTTAATAAGCGACAGTTGGAGTTCCTTTGATTTTTCAACCATGGAAGTCTTCTCATCAAGACCCTAA | 855 | 0.4643 | MFHHQLPSSSPMPIPTPMDRSSSSRWKPSIEVAPNCPRCASTNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKSRRGKSAKHPKTEGSFHGSDDRESSIGDQHNQTNGHVSCDIDMALVFAKFLNQEKSNIGEEQFESEATNNGSTSSNDAVIQPQKKSSDEAVGDTLEELSLSGIDELEGYFGAGGCDDEDVVQDVLWPHDATMSSSVMWQTPSMMQTQLEDLELELEYSLPFNEDGQLLPISSTSSTVNLISDSWSSFDFSTMEVFSSRP | 284 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi388g00036 | 284 | MobiDBLite | consensus disorder prediction | 146 | 176 | - | - | |
Sebi388g00036 | 284 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.4-RELATED | 25 | 166 | IPR045174 | GO:0003700|GO:0006355 | |
Sebi388g00036 | 284 | MobiDBLite | consensus disorder prediction | 78 | 118 | - | - | |
Sebi388g00036 | 284 | ProSiteProfiles | Zinc finger Dof-type profile. | 34 | 88 | IPR003851 | GO:0003677|GO:0006355 | |
Sebi388g00036 | 284 | Pfam | Dof domain, zinc finger | 34 | 88 | IPR003851 | GO:0003677|GO:0006355 | |
Sebi388g00036 | 284 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
Sebi388g00036 | 284 | ProSitePatterns | Zinc finger Dof-type signature. | 36 | 72 | IPR003851 | GO:0003677|GO:0006355 | |
Sebi388g00036 | 284 | MobiDBLite | consensus disorder prediction | 93 | 112 | - | - | |
Sebi388g00036 | 284 | MobiDBLite | consensus disorder prediction | 146 | 168 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi388g00036 | Sebi-Chr388 | 567145 | 567999 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi388g00036 | 21 | 137 | C2C2-Dof Transcription Factor Family | AT3G52440 | 59.504 | 2.30e-42 | 144 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-Dof | Sebi388g00036 | zf-Dof | 1.1e-31 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi388g00036 | - | - | mtr:11416134 | 270.781 |