Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi387g00014 ATGGGTGTTAACGAAGATTTCAATAACAAGGATGAAGAGTATGTGGAAGATGAAGTTCCACTTCCAGGATTTCGGTTCCATCCAACAGATGAAGAACTTGTTAGTTTCTATCTTAGAAGGAAGCTTGAAAAGAAACCCATCAGTATTGAGCTCATCAAACAGATTGATATCTACAAATATGATCCTTGGGATCTTCCAAAAGCGAGTGTAACTGGAGGAGAGAAAGAAGGGTACTTCTTTTGCAAAAGAGGAAGAAAGTATAGGAACAGCATAAGACCCAACAGAGTCACAGGGTCAGGGTTCTGGAAAGCAACAGGGATAGACAAGCCAGTGTATTCACATGGAGGAGAAGGCAATGACTGTGTTGGACTCAAGAAAACACTTGTTTACTACCGTGGCAGTGCAGGCAAAGGCACCAAAACTGATTGGATGATGCATGAGTTTCGCCTTCCTTCTAACACTGAAACCAAAACAAACCTTCCCAATGCCAACAAGAATTATCTAGATACTGCCCATGAAGCTGAAATTTGGACATTGTGTAGAATTTTCAAAAGAAATGTGCCACAAAGAAAGAACATGCCAGATTTGAGACAGTTAGGTGGTAAGCGTCATCATCATGAAAAGAGCAGAATGAGCAGTAATGGAAGTGATAATCAAGAAACATATATCAATTTTGGTTGTTATGAGAATGAGCAGAAACCTGCTGTCACATCAAGCAGTGAACAATATCAAAGGAATAATCATCATCAGCATCATGTAGGCGAGTTTAGCTCTCAGGTGGCACAACAACCTCAACAAAGTGTACCATCTTCCAACTTTTGGATTAATAACCCGGTTGCCAATGACTTCTTCACATTTGATAACTGGGATGAGCTTGGATCAGTTGTCAACTTTGCTGCTTAA 903 0.4031 MGVNEDFNNKDEEYVEDEVPLPGFRFHPTDEELVSFYLRRKLEKKPISIELIKQIDIYKYDPWDLPKASVTGGEKEGYFFCKRGRKYRNSIRPNRVTGSGFWKATGIDKPVYSHGGEGNDCVGLKKTLVYYRGSAGKGTKTDWMMHEFRLPSNTETKTNLPNANKNYLDTAHEAEIWTLCRIFKRNVPQRKNMPDLRQLGGKRHHHEKSRMSSNGSDNQETYINFGCYENEQKPAVTSSSEQYQRNNHHQHHVGEFSSQVAQQPQQSVPSSNFWINNPVANDFFTFDNWDELGSVVNFAA 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi387g00014 300 Gene3D NAC domain 29 188 IPR036093 GO:0003677|GO:0006355
Sebi387g00014 300 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 19 261 - -
Sebi387g00014 300 SUPERFAMILY NAC domain 18 185 IPR036093 GO:0003677|GO:0006355
Sebi387g00014 300 Pfam No apical meristem (NAM) protein 22 150 IPR003441 GO:0003677|GO:0006355
Sebi387g00014 300 FunFam NAC domain-containing protein 35 29 188 - -
Sebi387g00014 300 ProSiteProfiles NAC domain profile. 20 185 IPR003441 GO:0003677|GO:0006355
Sebi387g00014 300 MobiDBLite consensus disorder prediction 192 216 - -
Sebi387g00014 300 MobiDBLite consensus disorder prediction 234 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi387g00014 Sebi-Chr387 442245 444294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi387g00014 6 200 NAC Transcription Factor Family AT1G26870 60.714 1.07e-73 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sebi387g00014 NAM 1.6e-34 No_clan