LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi386g00024	ATGACTTCCATTAAGGTCATAGAGCAGTGTCTAATTGCACCACCACCTGGTTCACTTCCCTCAACCACTCTTCCCCTCACTTTCTTTGACATCCCATGGTTTTACTGCCACCCAGTGCAACGCATCTTCTTCTACCACTTTCCCTACCCCACACACCACTTCCTCCAAACAGCACTTCCAATTCTCAAGCACTCTCTTTCCCTCTCCCTCCAACATTTCTTCCCCTTCTCTTCCAATCTCATCGTCCCCTCAAACCCCCACCTCCACGTCCCTTACATCCGCTACCTCCCTAACGACTCTCTCTCCTTCACCGTTGCAGAGTCCACCGCAGACTTCAACCTCCTCATATCTGATTCACCACAGGACGTTCGAAACTGGCACCCCCTTGTCCCTACCCTGCCTTCACATCTTACAGAGGAAGATGGCACACGTGTGTTCCCTCTCATGGCCATTCAGATCACTGTCCTACCAAACTCTGGATTCAGCATCTGCCTCACGTTCAACCACCTTGCTGGAGATGGAAAATCACTTCACCATTTCATTAAGTATTGGGCCTCTGTTTCAAAGGCAACAAGATCAGGGGATTTGAGTTTGACTCCCCTTGAAGGCTCTCTGTCTCTTCCTTTCCATGATAGGAACAGAGTAAAAGACCCAAAGGGGCTTAAGCTTGTTTACACACGGGAACTACTGGATTCTGAGTCGGAAAAGATGGAGTTTGCAGGGATCGTGCAAGATGTTTACACTAACAAGGTACGTGCCACTCTTGTGTTGAGTCGTGAACGAGTTGAGAAACTAAAAAAATGGACCACTCTTCAATGTGCTTTAGGGATACAACACGTGTCAACCTTTGTGGTAACGTGCTCGTTGATTTGGGTTTCCATGATAAAATCAGAGCAGAGCAATGTTAATTGTGTTGATGAACATCAACTCTGCTACTTGGTGTTTCTAGCGGATTGTCGTGGTCGTCCTGAACTTTCAATACCTTCAACGTACTTTGGGAATTGTCTTGCAACTTGCATTGTGGCAATCAAGAGGGGTGAGCTAGTGGGAGAAAATGGGATTGTTGAGGTAGCAAATGGTATTCAAAGGGAAGTTAGAGATTGGAAGAAAGATGCATTACGAAGGGCTGACACGTTGATGTCAGATTATAGAGAATTAGCAAAACCAGGTCAGTGTGTGGTAGTAGTTGCAGGGTCACCAAAACTGGGTGTGTATGAGACTGATTTTGGGTGGGGAAAGCCTAAGAAGTCTGAAGCAGTGCATCTTGATTCATCAGGATCAATTTCTCTTTCTGATTGTAGAGACAAAGAAGGTGGAATTGAGGTTGGATTGGCACTTGAAAGAATTCGAATGACTACTTTCCTCAACATCGTAGAAGAACAACTTAATAATATTGTAGCACGTGAGTGA	1410	0.456	MTSIKVIEQCLIAPPPGSLPSTTLPLTFFDIPWFYCHPVQRIFFYHFPYPTHHFLQTALPILKHSLSLSLQHFFPFSSNLIVPSNPHLHVPYIRYLPNDSLSFTVAESTADFNLLISDSPQDVRNWHPLVPTLPSHLTEEDGTRVFPLMAIQITVLPNSGFSICLTFNHLAGDGKSLHHFIKYWASVSKATRSGDLSLTPLEGSLSLPFHDRNRVKDPKGLKLVYTRELLDSESEKMEFAGIVQDVYTNKVRATLVLSRERVEKLKKWTTLQCALGIQHVSTFVVTCSLIWVSMIKSEQSNVNCVDEHQLCYLVFLADCRGRPELSIPSTYFGNCLATCIVAIKRGELVGENGIVEVANGIQREVRDWKKDALRRADTLMSDYRELAKPGQCVVVVAGSPKLGVYETDFGWGKPKKSEAVHLDSSGSISLSDCRDKEGGIEVGLALERIRMTTFLNIVEEQLNNIVARE	469

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi386g00024	469	Gene3D	-	3	241	IPR023213	-
	Sebi386g00024	469	PANTHER	-	4	464	-	-
	Sebi386g00024	469	Gene3D	-	247	465	IPR023213	-
	Sebi386g00024	469	Pfam	Transferase family	4	456	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi386g00024	Sebi-Chr386	836933	838342	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sebi386g00024	31	460	Monolignol Biosynthesis Gene Families	AT5G48930	21.951	1.02e-13	70.9

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi386g00024	-		-	gmx:100797294	657.907