Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi385g00036 GGAGGTCGTATCCAATGCACGGTGAAGAGCATTCATGTGTATCTGTTTGAGAATAGTATCAACGAAGGTAATGTGTACATGCTAGAAAACCTCAGCGTTGCACTTAACAGTGGAAAGTACAAACCTACAATGCATGAATTTAGAATGTTCTTCGAGAGAGAGACACGAGTTACTCTGGTAGAAGATTCTTCCATTCCCCTCTATGGTTTTTCATTTGTCCCATTCGTTGAAATATTGAATGAAACTAAGGACGACAGACATTTGGTTGATGTACTAGGTGTTGTTACTGGGAAAGGTAATCTGATTGAGTTCAAGAAAGAGGGAAAGCCATGCAACTATGTTGTCATAGAGTTGGAAAATATTGAGGGAGGTCTTAAACTTAGGTGTACTTTATGGGAGGACTATGCTTTTATGTTTTTGAAACATTTGGAAGACCATCCATCTGAGTCCTATGTTGTTGTTCTTCAATTTGCAAAAATGAAAAATTTTAAAGGGTCAGTAGGTGTTTCAAACACAACTTACAACTCTAAGTTGTTTATCAATGCCAATATTCCTGAAATTGAAGACTTTCAAATGAGGTTGAAATCTCCTGATTCTCAACAAGGTATTCAGTTTAGTCAGTTAAGTGATCATGCTTCTTTGACCCTTGAGGAAGAATTTCTTGAAAGAGGAGTGTACAAATCAATTGCTGATTTGAAAGAAGTAACACAGAATCCTGTTTTTGTAACAATTGGGACTGTTAAGGACATTGAGTCTGAATATAACTGGTGCTATCGTGCCTGTAAGAAATGCTCTCTTGGTTTGAAGTTGGATGGGTCTATGTTCTATTGTAAAAAATGTGTCACTCATTATTCAACTTTTGTGACAAG 869 0.3682 GGRIQCTVKSIHVYLFENSINEGNVYMLENLSVALNSGKYKPTMHEFRMFFERETRVTLVEDSSIPLYGFSFVPFVEILNETKDDRHLVDVLGVVTGKGNLIEFKKEGKPCNYVVIELENIEGGLKLRCTLWEDYAFMFLKHLEDHPSESYVVVLQFAKMKNFKGSVGVSNTTYNSKLFINANIPEIEDFQMRLKSPDSQQGIQFSQLSDHASLTLEEEFLERGVYKSIADLKEVTQNPVFVTIGTVKDIESEYNWCYRACKKCSLGLKLDGSMFYCKKCVTHYSTFVT 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi385g00036 289 CDD RPA1_DBD_B_like 90 195 - -
Sebi385g00036 289 Gene3D - 1 63 IPR012340 -
Sebi385g00036 289 Gene3D - 64 206 IPR012340 -
Sebi385g00036 289 SUPERFAMILY Nucleic acid-binding proteins 70 195 IPR012340 -
Sebi385g00036 289 CDD RPA1_DBD_A_like 1 57 - -
Sebi385g00036 289 SUPERFAMILY Nucleic acid-binding proteins 227 284 IPR012340 -
Sebi385g00036 289 Pfam Domain of unknown function DUF223 1 85 IPR003871 -
Sebi385g00036 289 Gene3D - 219 289 IPR012340 -
Sebi385g00036 289 SUPERFAMILY Nucleic acid-binding proteins 2 63 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi385g00036 Sebi-Chr385 995581 996923 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi385g00036 1 280 Core DNA Replication Machinery Family AT2G06510 26.073 1.55e-16 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi385g00036 - - adu:107477146 306.99