Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi385g00035 ATGGCAATGATGGCCATGGTTATGGGTCTTGAAGGTTGTGGACCATGGATCAATTTGGGTTGTTCCTCACCTTACGGTACTAGAAACGGAAACTGTTTACTGCACACACCCAACTCCAATCATGCAACACTTGTTGATCCTCACCCAAATGGTGACACACAGACTGAAATGGTCTTCTTTGGGGGAAAACTTAAAGATGGAAGAGAAGTTGCAGTCAAGCACCTATTTGAGCATAATTACAGAAGAGTGGAACAGTTTATAAATGAAATTGAAGTCCTGAGTCGGTTGCGCCACAGAAACCTTGTGTCCCTTTATGGCTGCACTTCACGTCACACGAATTCAGCGGGTGGAACTATATGGATTTCCCCTCTAAGAAAATGGGTTTCTATCATTTGCTCTGTTACATGTTTATAA 414 0.4275 MAMMAMVMGLEGCGPWINLGCSSPYGTRNGNCLLHTPNSNHATLVDPHPNGDTQTEMVFFGGKLKDGREVAVKHLFEHNYRRVEQFINEIEVLSRLRHRNLVSLYGCTSRHTNSAGGTIWISPLRKWVSIICSVTCL 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi385g00035 137 Pfam Protein tyrosine and serine/threonine kinase 65 111 IPR001245 GO:0004672|GO:0006468
Sebi385g00035 137 SUPERFAMILY Protein kinase-like (PK-like) 58 110 IPR011009 -
Sebi385g00035 137 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 61 113 IPR044652 GO:0004672
Sebi385g00035 137 Gene3D Phosphorylase Kinase; domain 1 38 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi385g00035 Sebi-Chr385 929100 929693 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi385g00035 51 112 Receptor kinase-like Gene Family AT1G25390 67.742 9.32e-23 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Sebi385g00035 PK_Tyr_Ser-Thr 2.3e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi385g00035 - - gmx:100778085 112.849