Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi385g00026 ATGAATGTTGAAAGGCAATGCTTAGCAAGGGACATTGTCAATGTTGTTGCATGTGAAGGTGAGGATAGGATAGAACGGTATGAAGTTGCGGGAAAATGGAGAGCAATGATGACAATGGCTGGCTTCACTCCATCCCCAATGAGCACAAATGTGGCTGATGAAATCCGAAAACTCATTAAGTTGTACTGTGACAGGTACAAGATAGGGTGCACTTCATTTTGGTTGGGAAGACAAAAACTTATTGTTGCTTCAGCATGGAGGTGA 264 0.428 MNVERQCLARDIVNVVACEGEDRIERYEVAGKWRAMMTMAGFTPSPMSTNVADEIRKLIKLYCDRYKIGCTSFWLGRQKLIVASAWR 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi385g00026 87 Pfam GRAS domain family 2 87 IPR005202 -
Sebi385g00026 87 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 82 IPR005202 -
Sebi385g00026 87 ProSiteProfiles GRAS family profile. 1 87 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi385g00026 Sebi-Chr385 701575 701838 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi385g00026 1 87 GRAS Transcription Factor Family AT1G21450 65.217 1.82e-35 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sebi385g00026 GRAS 1.8e-20 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi385g00026 - - lja:Lj0g3v0158379.1 147.132