Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi385g00010 ATGTCACTGAAACTTATAAATTCATCAAGGTTCTTGGCAACAAAATTTTGGGATGACCCTGCTGCATCTATAGCAAAAGCATATCTGAGTACAGATCAGGCAATTCTTTCACATAGTTCTAATTTGGGGCATGGAGGATCAACAACTGTAACTGCAATATTAATCAATGGCCAAAAGTTATTGATAGCTAATGTAGGAGATTCACGAGCAGTTCTTTCAAGAAAAGGTCAAGCAGTGCAAGTGACTATAGATCACGAGCCCAACACAGAAAGAGGCAGCATTGAGAATAAAGGTGGTTTTGTCTCCAACATTCCAGACTCTGCACAAGACGGTAACCAAGCGCTCTTCTGGTTCTGGACAAGCTTGCTTCCTCCTCTTTCTTGGGTTTTCCTCACTAATTCCCACCAATGCTTACAAACACACGAGGCTTGTCTTAAACCTTGGGAAAAGGAGGTGCATTACCCATGCCATTGGCCAAGCTACAAAGGAAGAGTTGGTGGTGGTTGTTGGGGTGGAGCTGTAGGGGTGTATGGAGCAATTCATGCCAAGATTGTGGCACCTCACCTCGGTGTGGTGGTTATTGAGAAGGGAAAGCCTCTCTCCAAGGTGAAAGTTTCTGGAGGAGGCCGGTGCAATGTGATTAATGGGCATTGTGCTGACAATGTGGTAGTCCTCCTTTCCTTTTGA 687 0.4469 MSLKLINSSRFLATKFWDDPAASIAKAYLSTDQAILSHSSNLGHGGSTTVTAILINGQKLLIANVGDSRAVLSRKGQAVQVTIDHEPNTERGSIENKGGFVSNIPDSAQDGNQALFWFWTSLLPPLSWVFLTNSHQCLQTHEACLKPWEKEVHYPCHWPSYKGRVGGGCWGGAVGVYGAIHAKIVAPHLGVVVIEKGKPLSKVKVSGGGRCNVINGHCADNVVVLLSF 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi385g00010 228 SUPERFAMILY PP2C-like 11 103 IPR036457 -
Sebi385g00010 228 Gene3D - 5 141 IPR036457 -
Sebi385g00010 228 Gene3D - 169 224 IPR036188 -
Sebi385g00010 228 ProSiteProfiles PPM-type phosphatase domain profile. 1 228 IPR001932 -
Sebi385g00010 228 PANTHER PROTEIN PHOSPHATASE 21 116 IPR015655 GO:0004722|GO:0006470
Sebi385g00010 228 CDD PP2Cc 18 103 IPR001932 -
Sebi385g00010 228 Pfam Protein phosphatase 2C 15 103 IPR001932 -
Sebi385g00010 228 Pfam HI0933-like protein 171 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi385g00010 Sebi-Chr385 259726 261107 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi385g00010 15 105 PP2C-type Phosphatase Gene Family AT1G34750 72.527 8.05e-39 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi385g00010 K17506 - jre:108984820 144.436