Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi384g00061 ATGGGGAAGGGAGGCCAAGATTATGGGAGAAAAGAGAACACGAGTTCTGAGTCTTCGGACCGTGAAATCTTCAAGGCGTGGTCCAAGGACGTGCGTGAATGCGAGGAACACTTTAAGGTGAGAGTGAAAACGGGGTTGAATCACGACGAGGTTGAGAATCGGCGCAAGATCTATGGCTCGAACGAATTGGAGAAGCACGACGGACAGTCTATTTGGAGTTTGATTCTGGAACAGTTCAATGACACGTTGGTTCGGATTCTTCTCGCCGCCGCTATCATCTCCTTCGTACTTGCTTGGTACGATGGCGAAGAAGGTGGCGAGATGGAGATTACGGCTTTTGTGGAGCCTCTGGTGATATTCCTGATATTGATTGTGAATGCAATCGTTGGGGTATGGCAAGAGAGCAATGCGGAGAAGGCACTTGAGGCGTTGAAGGAGATTCAATCGGATCACGCCATGGTGATTCGAGATAGCGTGAAAATCCCTAATTTGCCGGCCAAGGATCTTGTGCCTGGTGATATTGTGGAGCTTAAGGTTGGCGATAAGGTGCCTGCAGATATGCGGGTTGTGGCATTGATTAGCTCCACTTTGCGATTGGAGCAGGGTTCTTTGACTGGAGAGAGTGAAGCAGTGAATAAGACTAACAAGCCTGTTCCTGAGGATGCTGATATTCAAGGCAAGAAGTGTATGGTTTTCGCGGGGACGACTGTTGTTAACGGGAACTGCATTTGCTTGGTCACACAGACCGGCATGGATACCGAGATTGGGAATGTGCATAAGCAGATACACGTAGCGTCGCAGAGTGAGGATGATACCCCCTTGAAGAAGAAGCTCAATGAGTTCGGAGAGAATCTAACCATTATAATTGGGTTGATATGTGCTTTGGTTTGGCTCATCAATGTTAAGTACTTCCTGACCTGGGAGTATGTGGATGGGTGGCCAAGGAACTTCAAGTTTTCATTTGAGAAGTGTACGTATTACTTTGAGATTGCTGTGGCATTGGCTGTGGCTGCCATTCCAGAGGGTTTGCCTGCAGTCATCACGACTTGCCTCGCACTAGGTACTCGAAAGATGGCCCAGAAGAATGCCCTGGTTCGGAAGCTACCAAGCGTGGAAACTCTGGGTTGTACAACTGTGATTTGTTCAGATAAAACTGGTACTTTGACTACGAACCAGATGTCTGTGACAAAACTAGTAGCTATTGGCCATAATGTAGACACGCTGCGAGCCTTCAAGGTGGAAGGAACTACTTACAATCCATCTGATGGTAAAATAGAGAACTGGGTAACAGGTGGATTGGATGCTAATCTTCAGATGATCGCAAAAATAGCTGCTGTCTGTAATGATGCTGGAGTCACACAGTCAGAGCATAAGTTTGTTGCCCATGGAATGCCTACTGAAGCAGCCTTAAAGGTTTTGGTAGAGAAGATGGGTCTTCCTGAAGGATCTAATGATGCACGATCAGCAAGCAAGAATACCTTACTACGTTGTTGTGAATGGTGGAATGAACATGACCGGCGGATTGCAACTCTTGAGTTCGACCGTGATAGGAAGTCAATGGGCGTTATTGTGGACTCTGGTCCAGGGAAAAAGTCGCTTCTGGTCAAGGGTGCTGTAGAAAATGTATTGGAAAGAAGCTCTAAAATTCAGTTGCGTGACGGTTCTGTTGTGAATCTGGACAATAATGCAAGGAACCTCATATTACAAGCTCTTCATGAAATGTCAACTAGTGCGTTACGCTGTTTGGGTTTTGCTTACAAGGATGAGCTCAGTGCATTTGAAAACTACAATGGTAATGATGATCATCCAGCCCACCAGCTTTTGCTTAATCCTTCCAACTATTCATCAATTGAAAGTGAACTTATTTTTGTTGGCTTGGATCCTCCTAGGGAGGAGGTATACCAAGCAATCGAAGACTGCAGAGCAGCTGGAATTCGTGTTATAGTTATAACTGGAGACAATAAGAACACTGCTGAAGCTATATGCCGTGAAATAGGTGTATTTGAACCCAATGAAGACATTAGTTCAAAAAGTGTAACTGGTAGAGATTTTATGGAGGTGCGTGATAAAAAAGCCTATTTGAGACAGAGTGGTGGGCTTTTGTTTTCGAGGGCTGAACCTAGGCATAAGCAAGATATTGTGAGGCTGCTCAAAGAGGAAGGGGAGGTGGTGGCCATGACTGGGGATGGCGTTAATGATGCGCCTGCCTTGAAGCTTGCAGACATTGGTGTGGCAATGGGCATTGCAGGGACAGAGGTGGCAAAGGAAGCTTCAGATATGGTACTGGCAGATGATAATTTCAGTACCATTGTAGCTGCTGTTGGTGAAGGATGTGGTGTGGTACCTTATAATACGTTAGGCTCATGCTCTATCAGTGGTCTATACATGATCTCTTCCAATATTGGTGAGGTTGCTTCTATATTTCTAACAGCTGCACTAGGTATTCCTGAAGGATTGATACCTGTCCAGCTTCTGTGGGTCAATCTTGTCACTGATGGACCCCCTGCAACGGCTTTGGGATTTAATCCTCCAGATAAGGATATAATGAAGAAGCCTCCTCGTCGCAGTGATGACTCACTAATTAATTTGTGGATTTTATTCCGCTATCTGGTTATTGGGATTTATGTTGGATTAGCTACGGTTGGTGTTTTCATTATATGGTATACACATGGTTCCTTCTTGGGTATTGACCTTAGCGGGGATGGGCATACACTCGTCACTTACTCCCAACTTGCCAACTGGGGTCAGTGCTCCTCGTGGAAGAATTTCACTGCTTCTCCCTTCACTGCTGGTGCTAGAACTATTTCTTTTGATAATGATCCCTGTGACTACTTCCAGACTGGTAAAGTGAAAGCTATGACACTGTCTCTCTCTGTGTTGGTAGCCATCGAAATGTTCAACTCTCTTAATGCCCTATCTGAAGATGGAAGTCTTTTGACAATGCCCCCTTGGGTCAACCCTTGGCTTCTTTTGGCAATGTCTGTGTCATTTGGTCTGCACTTTTTGATCTTGTATGTGCCATTCTTAGCACAAGTATTTGGCATTGTGCCCCTGAGCTTCAATGAGTGGCTTTTGGTTTTGGCTGTTGCATTGCCCGTCATTCTAATTGATGAGATTCTGAAATTTGTGGGGAGGTGTACGAGTAGATCTCAAGCATCAAGTGCAAGAAGATCAAAGCAAAAATCAGAGTAG 3192 0.4533 MGKGGQDYGRKENTSSESSDREIFKAWSKDVRECEEHFKVRVKTGLNHDEVENRRKIYGSNELEKHDGQSIWSLILEQFNDTLVRILLAAAIISFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGVWQESNAEKALEALKEIQSDHAMVIRDSVKIPNLPAKDLVPGDIVELKVGDKVPADMRVVALISSTLRLEQGSLTGESEAVNKTNKPVPEDADIQGKKCMVFAGTTVVNGNCICLVTQTGMDTEIGNVHKQIHVASQSEDDTPLKKKLNEFGENLTIIIGLICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTKLVAIGHNVDTLRAFKVEGTTYNPSDGKIENWVTGGLDANLQMIAKIAAVCNDAGVTQSEHKFVAHGMPTEAALKVLVEKMGLPEGSNDARSASKNTLLRCCEWWNEHDRRIATLEFDRDRKSMGVIVDSGPGKKSLLVKGAVENVLERSSKIQLRDGSVVNLDNNARNLILQALHEMSTSALRCLGFAYKDELSAFENYNGNDDHPAHQLLLNPSNYSSIESELIFVGLDPPREEVYQAIEDCRAAGIRVIVITGDNKNTAEAICREIGVFEPNEDISSKSVTGRDFMEVRDKKAYLRQSGGLLFSRAEPRHKQDIVRLLKEEGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFSTIVAAVGEGCGVVPYNTLGSCSISGLYMISSNIGEVASIFLTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLINLWILFRYLVIGIYVGLATVGVFIIWYTHGSFLGIDLSGDGHTLVTYSQLANWGQCSSWKNFTASPFTAGARTISFDNDPCDYFQTGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQVFGIVPLSFNEWLLVLAVALPVILIDEILKFVGRCTSRSQASSARRSKQKSE 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi384g00061 1063 Gene3D - 391 628 IPR023299 GO:0000166
Sebi384g00061 1063 SFLD C1.7: P-type atpase like 362 777 - -
Sebi384g00061 1063 FunFam calcium-transporting ATPase, endoplasmic reticulum-type 391 630 - -
Sebi384g00061 1063 SUPERFAMILY HAD-like 369 772 IPR036412 -
Sebi384g00061 1063 Pfam Cation transporting ATPase, C-terminus 817 1043 IPR006068 -
Sebi384g00061 1063 Gene3D - 77 1045 - -
Sebi384g00061 1063 SMART Cation_ATPase_N_a_2 25 99 IPR004014 -
Sebi384g00061 1063 Gene3D - 44 265 - -
Sebi384g00061 1063 FunFam Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 237 411 - -
Sebi384g00061 1063 ProSitePatterns E1-E2 ATPases phosphorylation site. 383 389 IPR018303 -
Sebi384g00061 1063 Gene3D - 378 772 IPR023214 -
Sebi384g00061 1063 PANTHER CALCIUM-TRANSPORTING ATPASE 27 1055 - -
Sebi384g00061 1063 Pfam Cation transporter/ATPase, N-terminus 27 94 IPR004014 -
Sebi384g00061 1063 NCBIfam HAD-IC family P-type ATPase 118 308 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi384g00061 1063 NCBIfam HAD-IC family P-type ATPase 320 402 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi384g00061 1063 NCBIfam HAD-IC family P-type ATPase 701 813 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi384g00061 1063 FunFam Calcium-transporting ATPase, putative 127 263 - -
Sebi384g00061 1063 MobiDBLite consensus disorder prediction 1 22 - -
Sebi384g00061 1063 FunFam ECA1 (ER-TYPE CA2+-ATPASE 1) 796 1050 - -
Sebi384g00061 1063 SUPERFAMILY Calcium ATPase, transduction domain A 150 260 IPR008250 -
Sebi384g00061 1063 SUPERFAMILY Calcium ATPase, transmembrane domain M 25 1046 IPR023298 -
Sebi384g00061 1063 Pfam E1-E2 ATPase 147 361 - -
Sebi384g00061 1063 SFLD p-type atpase 362 777 IPR044492 -
Sebi384g00061 1063 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 388 626 IPR023299 GO:0000166
Sebi384g00061 1063 Pfam haloacid dehalogenase-like hydrolase 378 741 - -
Sebi384g00061 1063 PRINTS P-type cation-transporting ATPase superfamily signature 643 653 - -
Sebi384g00061 1063 PRINTS P-type cation-transporting ATPase superfamily signature 381 395 - -
Sebi384g00061 1063 PRINTS P-type cation-transporting ATPase superfamily signature 727 746 - -
Sebi384g00061 1063 PRINTS P-type cation-transporting ATPase superfamily signature 200 214 - -
Sebi384g00061 1063 PRINTS P-type cation-transporting ATPase superfamily signature 751 763 - -
Sebi384g00061 1063 PRINTS P-type cation-transporting ATPase superfamily signature 621 632 - -
Sebi384g00061 1063 FunFam Calcium-transporting P-type ATPase, putative 625 772 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi384g00061 Sebi-Chr384 810490 816387 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi384g00061 1 1063 Primary Pumps ATPases(2) AT1G07670 79.120 0.0 1707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi384g00061 K01537 - gmx:100788807 1894.78