Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi384g00053 ATGGATATTCAGGAAGCAGAAAGGGTGGTTGTTGCCAAACCAGTTGCTTCAAGGCCTAGTTGTTCTACTTTCAAATCTTTCTCAGAGCTCTTAGCAGGTGCAATCAATGCCTCTCCCCCTATTGTATCTCCTCAAACTACAGTTTCTGCCATTAGGCCAAAGACAGTGAGGTTCAAGCCAGCTGTGAATAGCTCCCCTGCTGGGTCTGTTTCTTCTCAGGCTGACATTTCTGGTGCTGCACTTAACAATTCTTTTGACATGTGTCCTAAACCTGACACCATGCAGTCCCTCATATACAAACCAATGCCAAAACTTGTGTCAAAAACAACTGTTTCTCTTTTGGCAAATATGGGGAATTGCAAAACTAGTCAGCAACAACCAAAGCAATCAATGGAGGCCAATCTTCATCATGCTAACCATGAAAAATTTAGAACCAATATGAGCTCAAATCTTCATCAGAACATCACCCCACATGCTGAAACATATCAGAACACTGAACCTTGTAAGATGGTACAACAGAACCTTGAAGAGGATCAAAAGGCTTTAACATCTACTATTAATGGTGATAGACCTTCTTATGATGGGTATAATTGGAGGAAATATGGGCAGAAGCAAGTAAAAGGAAGTGAATACCCAAGAAGTTATTACAAGTGCACACATCCTAATTGTCCAGTGAAAAAGAAAGTTGAAAGATCATTTGATGGACAAATTGCAGAAATTGTATACAAAGGTGAGCACAATCATCCAAAACCACAGCTTCCTAAGCGCAACTCAACAGGGACACAAGGTTCAGGAATGATGTCTGATGGAATAGCTCAAGATATATGGAGTAATAATAATCAGAGTGAGAGGAATGAAGGTAGAATAGAGAACCAGAATGACACAGGACTATCTGTGCATTCAGCTTATCATGTCAAGGCTCCACAGGCTAATGATTCTATTCTAATTGGTGCAAATAATGCTGGTGGAGGAAACTTAGAAAATTCTTGCGGTCTAAGTGGGGAATGTGATGAAGGAAGCAAGGGATTTGAGGCAGAGGAAGATGAACCCAGAAGTAAAAGAAGGAAAAATGAGAATCAATCCAATGAAGCAGCTGTATCAGAGGAAGGTTTAGCAGAGCCACGCGTTGTGACACAAAGTTCTATTGATTCTGAAATACTTGGAGATGGCTTTCGCTGGAGGAAATATGGTCAGAAGGTGGTGAAGGGAAATCCATATCCCAGAAGCTACTATAGATGCACTAATATCAAGTGTAACGTTCGCAAACATGTGGAGAGAGCAATAGATGACCCGAAATCATTTGTGACTACATATGAGGGAAAGCACAACCATGAGATGCCACTCAAGAACACAGCAAGTGTGGCCTCTGAGAAAGATTCACAGGCTTCTCTTAGTAAAGATAAACCATAG 1410 0.4106 MDIQEAERVVVAKPVASRPSCSTFKSFSELLAGAINASPPIVSPQTTVSAIRPKTVRFKPAVNSSPAGSVSSQADISGAALNNSFDMCPKPDTMQSLIYKPMPKLVSKTTVSLLANMGNCKTSQQQPKQSMEANLHHANHEKFRTNMSSNLHQNITPHAETYQNTEPCKMVQQNLEEDQKALTSTINGDRPSYDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSFDGQIAEIVYKGEHNHPKPQLPKRNSTGTQGSGMMSDGIAQDIWSNNNQSERNEGRIENQNDTGLSVHSAYHVKAPQANDSILIGANNAGGGNLENSCGLSGECDEGSKGFEAEEDEPRSKRRKNENQSNEAAVSEEGLAEPRVVTQSSIDSEILGDGFRWRKYGQKVVKGNPYPRSYYRCTNIKCNVRKHVERAIDDPKSFVTTYEGKHNHEMPLKNTASVASEKDSQASLSKDKP 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi384g00053 469 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 129 462 IPR044810 GO:0003700
Sebi384g00053 469 MobiDBLite consensus disorder prediction 440 469 - -
Sebi384g00053 469 Pfam WRKY DNA -binding domain 389 445 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi384g00053 469 Pfam WRKY DNA -binding domain 194 249 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi384g00053 469 MobiDBLite consensus disorder prediction 243 272 - -
Sebi384g00053 469 ProSiteProfiles WRKY domain profile. 194 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi384g00053 469 FunFam WRKY transcription factor 175 252 - -
Sebi384g00053 469 ProSiteProfiles WRKY domain profile. 382 447 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi384g00053 469 MobiDBLite consensus disorder prediction 253 272 - -
Sebi384g00053 469 Gene3D WRKY domain 372 448 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi384g00053 469 Gene3D WRKY domain 176 252 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi384g00053 469 SMART WRKY_cls 387 446 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi384g00053 469 SMART WRKY_cls 192 250 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi384g00053 469 FunFam WRKY transcription factor 375 448 - -
Sebi384g00053 469 SUPERFAMILY WRKY DNA-binding domain 382 447 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi384g00053 469 MobiDBLite consensus disorder prediction 335 377 - -
Sebi384g00053 469 MobiDBLite consensus disorder prediction 344 362 - -
Sebi384g00053 469 SUPERFAMILY WRKY DNA-binding domain 190 251 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi384g00053 Sebi-Chr384 701690 703858 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi384g00053 92 448 WRKY Transcription Factor Family AT2G37260 45.067 1.44e-89 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi384g00053 WRKY 6.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi384g00053 - - gmx:100794069 751.125