Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi384g00050 ATGGCCATCACTGTATTATATCTTGTGTGCAGGTTCTTGATCGGGGAGAGAAGATTGAGGTTTTGGTGGATAAAACTGAGAACCTTCACAATCAGATCTTGTTTGAGAAGAAGAGAAAAGAAAGGAAAAATGTCGGGACAAACACAACGTCTGAATGTGGTCCCCACAGTGACGATGCTGGGAGTGGTGAAAGCTCGTTTGGTGGGAGTGACAAGAGGTCACGCGCTTCTGAAGAAGAAGAGCGATGCTCTCACTGTGCAGTTCAGGCAGATCCTGAAGAAGATTGTGTCCACCAAGGAATCAATGGGTGACATCATGAAGACCTCTTCTTTCGCCTTGACTGAGGCCAAGTATGTTGCTGGTGACAACATCAAGCATGTTGTGCTTGAGAATGTTAAAGAAGCTTCCCTCCGAGTCCGCTCTCGCCAGGAGAATGTTGCCGGAGTTAAGCTTCCCAAGTTTGATTACACTGCAGATGGTGAGGCCACCAAGAATGACCTCACTGGATTGGCAAGGGGTGGCCAGCAGGTGCAGCAGTGCTGTGCTGCTTACATCAAGGCAATTGAGGTTCTTGTTGAGCTTGCTTCCCTTCAAACCTCTTTCCTCACCCTTGATGAGGCCATCAAGACCACCAACCGTAGGGTCAATGCTCTTGAGAATGTCGTCAAGCTGAGGCTTGAGAACACCATTAGTTACATCAAGGAGGAAAGAAAGGTTGAAATCTGTGGAGATGAGGAGGAGGATGCAAATGCGGTGGCCATGGCTCCTCAGCCTCAGCCTTCAACCACTTTTGTTTATCTGACGTGGCCCAACCACAACTTCGGTTGGATTGCCATGCTATTATCTGTAAATCCCCATCCTATTATCGGTAGTGATAATAGAACTTGTCTGCTCTGGCCCTATCATTGTTGCGATCCCGTCGAGACCACCACCGCCGAAACCAGTCGATCTGCCATCGCGAGTCCGTCTCCATCCGCGTCGCGAGTCGATCTGCGATTCTGCAGCCGCATCACTATCCACCGGTCCACCGTGAGCAGAAGCCATCGCGAAGCTGCCGTGTCACGAATCGGTGTCCGTCGAGAAGCTGCCGCGTCACGAGTCAGTGTCCGTCGATCTGCAGGTTTTACTTCAATTCATCCCCCTTCCCCTTCGTCATACAGGTAA 1164 0.5034 MAITVLYLVCRFLIGERRLRFWWIKLRTFTIRSCLRRREKKGKMSGQTQRLNVVPTVTMLGVVKARLVGVTRGHALLKKKSDALTVQFRQILKKIVSTKESMGDIMKTSSFALTEAKYVAGDNIKHVVLENVKEASLRVRSRQENVAGVKLPKFDYTADGEATKNDLTGLARGGQQVQQCCAAYIKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKLRLENTISYIKEERKVEICGDEEEDANAVAMAPQPQPSTTFVYLTWPNHNFGWIAMLLSVNPHPIIGSDNRTCLLWPYHCCDPVETTTAETSRSAIASPSPSASRVDLRFCSRITIHRSTVSRSHREAAVSRIGVRREAAASRVSVRRSAGFTSIHPPSPSSYR 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi384g00050 387 Pfam ATP synthase subunit D 61 236 IPR002699 GO:0046961
Sebi384g00050 387 NCBIfam V-type ATP synthase subunit D 52 234 IPR002699 GO:0046961
Sebi384g00050 387 Gene3D - 42 238 - -
Sebi384g00050 387 PANTHER V-TYPE ATP SYNTHASE SUBUNIT D 44 236 IPR002699 GO:0046961
Sebi384g00050 387 FunFam V-type proton ATPase subunit D 44 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi384g00050 Sebi-Chr384 636793 645369 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi384g00050 44 236 Primary Pumps ATPases(2) AT3G58730 84.974 2.96e-114 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi384g00050 K02149 - gmx:100808847 352.443