Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi384g00030 ATGGGGAGGAAGGGAAATTGGTTTTCTACTGTGAAGAAAGCTCTCAGCCCTGACTCAAAGAAATCAAGTAAATCAAAGAAGAAATGGTTTGGGAAGCAAAAATTGCAGACTCCAGACTCATCATACCCGGAAACTGATAAAGCACCACCTCTTCCTCCACCGGAAGAGATTAAATTAACTGAGATAGAAAATGAAAACAGTCACGTTCATGTTGCTGAAGTAGCAACTGTTGTGGATGTTGAGGAACCTGTTCCTTCTGCTCAAACAGCAGTGGTTAGGGTTGAACCTGCCACAATTGCTCGGTTTGCTGGTAAACCAAAGGATGAAGTGGCAGCAATCAAGATTCAAACAGCTTTTCGGGGATACTTGGCAAGAAGAGCATTGCGGGCTTTGAGAGGGCTGGTCAGGTTGAAATCATTGATGGAAGGACCCATTGTAAAACGCCAAGCCATGAGTACTCTCCGCTCTATGCAGACATTAGCTCGTGTGCAATCTCAGATCCGTTCTAGGAGGATCAGAATGTTAGAGGAGAATCAGGCTCTACAGAAACAGCTCTTACAGAAGCATGCAAGAGAGCTTGAGAGCATGCGGATTGGGGAGGAATGGGATGATAGCCTGCAATCAAAAGAACAGATCGAAGCCAAGTTACTAAGCAAGTATGAGGCTGCTATGAGAAGAGAAAGAGCGCTGGCTTATGCATTCACTCATCAGCAAAACTGGAAGAACTCATCTAGATCTATAAATCCAATGTTCATGGATCCAACCAATCCTAGCTGGGGTTGGAGCTGGTTAGAACGATGGATGGCAGCCAGGCCTTGGGAGGGTCGTAGCCTTATAGATAAAGAGCTGAATGACCATTCATCTGTAAAAAGTTCAAGCCGTAGCATTACTGGTGGAGGAGAAATCAGCAAATCATTTGCTCGTTTCCAGCTCAATTCTGAAGTACATTCTCCAGCAGCCAGTCAAAATCCTGGCTCACCTAGCTTTCCACCCCATTCAACTCCTTCCAGGCCAGCTTCTTCATCAGTTGGTAAGAAGCCAAAGAAGGTAAGCCCAAGGGGCAGCTGGGTTATGGATGATGACTCCAAAAGCATGGTCAGTGTACAGTCAGACCGATTCCGGAGGCACTCCATTGCCGGTTCAACAGTCAGAGATGATGAGAGCCTTGCTAGCTCTCCAGCAGTTCCAAGTTACATGGTACCAACTCAATCTGCAAAAGCCAAGTCAAGGACACAAAGTCCATTAGCCACAGAAAATGGTAAAACAGAAAAGGGCTCCTTTGGTACTGCAAAGAAGCGTCTTTCTTTCCCAGCTTCACCTGCCAGACCAAGGCGTCATTCAGGTCCACCAAAGGTAGAAAGCAGCAGCATAAATGCAGAGCTCACTGTGGAAAATGGTGTGGCCAGTTGA 1410 0.4631 MGRKGNWFSTVKKALSPDSKKSSKSKKKWFGKQKLQTPDSSYPETDKAPPLPPPEEIKLTEIENENSHVHVAEVATVVDVEEPVPSAQTAVVRVEPATIARFAGKPKDEVAAIKIQTAFRGYLARRALRALRGLVRLKSLMEGPIVKRQAMSTLRSMQTLARVQSQIRSRRIRMLEENQALQKQLLQKHARELESMRIGEEWDDSLQSKEQIEAKLLSKYEAAMRRERALAYAFTHQQNWKNSSRSINPMFMDPTNPSWGWSWLERWMAARPWEGRSLIDKELNDHSSVKSSSRSITGGGEISKSFARFQLNSEVHSPAASQNPGSPSFPPHSTPSRPASSSVGKKPKKVSPRGSWVMDDDSKSMVSVQSDRFRRHSIAGSTVRDDESLASSPAVPSYMVPTQSAKAKSRTQSPLATENGKTEKGSFGTAKKRLSFPASPARPRRHSGPPKVESSSINAELTVENGVAS 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi384g00030 469 PANTHER IQ-DOMAIN 5-RELATED 1 451 - -
Sebi384g00030 469 Pfam IQ calmodulin-binding motif 111 129 IPR000048 GO:0005515
Sebi384g00030 469 SMART iq_5 107 129 IPR000048 GO:0005515
Sebi384g00030 469 MobiDBLite consensus disorder prediction 315 469 - -
Sebi384g00030 469 MobiDBLite consensus disorder prediction 1 54 - -
Sebi384g00030 469 Pfam Protein of unknown function (DUF4005) 385 445 IPR025064 -
Sebi384g00030 469 MobiDBLite consensus disorder prediction 395 424 - -
Sebi384g00030 469 MobiDBLite consensus disorder prediction 451 469 - -
Sebi384g00030 469 Gene3D - 93 134 - -
Sebi384g00030 469 ProSiteProfiles IQ motif profile. 108 136 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi384g00030 Sebi-Chr384 467422 470610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi384g00030 1 469 IQD Protein Family AT5G03040 53.484 1.02e-151 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi384g00030 - - gmx:100800080 705.671