Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi384g00023 ATGAGTGTCATCGACATTCTTACCAGAGTTGATTCCATTTGTAAAAAGTATGACAAATACGACGTCGATAAGCAAAAGGATTCCAATCTCACCGGGGATGATGCATTCGCCAAACTCTACACCGTCATTGACGCCGACATTGAGGCAGCGCTTCAGAAAGCAGAAACCGCTTCCAAGGAGAAAGGTAAGGCATCTGCTGTAGCGATCAATGCCGAGATTCGTCGTACAAAAGCTAGGTTGCTGGATGAGGTTCCCAAGTTGCAGAGGTTGGCTGTAAAGAAGGTAAAGGGGCTTTCATCACAAGAATTTGCGGCCCGTAATGATTTGGTTCTTGCATTGCCAGAGAGGATCCAAGCAATCCCAGATGGGACCCCTACTGTGCCCAAACAATCTGGAGGTTGGGGATGGGGAGCTTCTGCTTCACGTCCTGAAATTAAATTTGATTCAGATGGGCGATTTGACGATGAATACTTCCAACAAACAGAAGAATCAAGTCAATTCAGACAGGAGTATGAAATGCGTAAAATGAAACAGGATCAAGGTTTGGATATGATCGCAGAAGGGTTGGATACTTTGAAAAACATGGCACACGATATGAATGAGGAACTGGATAGACAAGTTCCATTGATGGATGAGATTGATACTAAGGTGGATAAGGCATCCTCTGACCTTAAAAATACCAATGTTAGACTTAAAGATACAGTGACCCAGCTTCGATCCAGCCGAAACTTCTGTATTGATATTGTTTTGTTGATTATAGTTTTGGGAATTGCTGCCTATTTGTACAAGTAA 792 0.4306 MSVIDILTRVDSICKKYDKYDVDKQKDSNLTGDDAFAKLYTVIDADIEAALQKAETASKEKGKASAVAINAEIRRTKARLLDEVPKLQRLAVKKVKGLSSQEFAARNDLVLALPERIQAIPDGTPTVPKQSGGWGWGASASRPEIKFDSDGRFDDEYFQQTEESSQFRQEYEMRKMKQDQGLDMIAEGLDTLKNMAHDMNEELDRQVPLMDEIDTKVDKASSDLKNTNVRLKDTVTQLRSSRNFCIDIVLLIIVLGIAAYLYK 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi384g00023 263 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 172 234 IPR000727 -
Sebi384g00023 263 SMART tSNARE_6 167 234 IPR000727 -
Sebi384g00023 263 SUPERFAMILY SNARE fusion complex 165 232 - -
Sebi384g00023 263 CDD SNARE_Qc 177 232 - -
Sebi384g00023 263 MobiDBLite consensus disorder prediction 121 140 - -
Sebi384g00023 263 FunFam Putative syntaxin-71-like 172 233 - -
Sebi384g00023 263 ProSitePatterns Syntaxin / epimorphin family signature. 178 217 IPR006012 GO:0005484|GO:0006886|GO:0016020
Sebi384g00023 263 Pfam SNARE domain 209 258 IPR000727 -
Sebi384g00023 263 PANTHER SYNTAXIN 44 253 IPR045242 -
Sebi384g00023 263 Gene3D - 179 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi384g00023 Sebi-Chr384 354716 356854 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi384g00023 1 262 SNARE and Associated Proteins AT3G09740 77.863 4.29e-155 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi384g00023 K08506 - gmx:100819272 449.129