Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi383g00047 ATGATGTCTTCTGATAGCTCTGATCAAATTTCAAGTCTTGCATCATGGAGAAAGCAAAAGGGGGCATGGCTAAGCCTGCACCCTCCAGGTACCCATGGTTGTTCATTCTGCAGTAAGGGATTCAAGTCCATGCAGGCTGTTGGTGGACACCAGAATGCTCACCGCAATGTGAGATATCAAATGAAGATGCAGAAGGTGTACATGGAAATCATGGAAGAAGAAAGAAGGAAGGAGATTCGAGAGGGGAAGCGCATTCAGCATTCTCCTAATTGCCCCTACAACACTGGTGAGGGTGAAATTGACTTGGAGCTGCGCCTTGGAATTAACCCTGCTCCAAAAATTGAATTTTTTGAGTTCCTTCCTGTTTTGAAAGGATATGGTGATTCTGTTCAAACCCATCCTAATCAGAACATGATGTTTCATCATCAGATAATTGAAAGGCCACCCCTGGTGAAAGATGGAGTACTGAATGAAGATGGTGTTGGTGGTAGCAGCTACTTTGTGAATCAACAAGGAAGGAGAATCTCTTCCAAGAATGGCCTTGACCTCACTTTGAGGCTGTGA 564 0.445 MMSSDSSDQISSLASWRKQKGAWLSLHPPGTHGCSFCSKGFKSMQAVGGHQNAHRNVRYQMKMQKVYMEIMEEERRKEIREGKRIQHSPNCPYNTGEGEIDLELRLGINPAPKIEFFEFLPVLKGYGDSVQTHPNQNMMFHHQIIERPPLVKDGVLNEDGVGGSSYFVNQQGRRISSKNGLDLTLRL 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi383g00047 187 PANTHER OS07G0101800 PROTEIN 15 71 - -
Sebi383g00047 187 ProSitePatterns Zinc finger C2H2 type domain signature. 34 54 IPR013087 -
Sebi383g00047 187 ProSiteProfiles Zinc finger C2H2 type domain profile. 32 59 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi383g00047 Sebi-Chr383 840065 840628 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi383g00047 12 66 C2H2 Transcription Factor Family AT5G06070 41.818 7.16e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi383g00047 - - lja:Lj1g3v4372230.1 87.4261