LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi383g00030	ATGCTCTGTTCCACTCCTTATTCCCTACTCGCTACCATTATTTTCTCAGCGCTAATCCTTCTTCATCCATCAAATGCTCAATTGAGTTCAACCTTCTACTCCAACACATGCCCCAATGTGTCTTCTATAGTGACAAGTGTTATTCAGCAGGCTCTGCAATCTGATCCTCGTATTGGCGCAAGCCTAACTCGTCTTCATTTTCATGATTGCTTTGTTAATGGATGTGATGCATCGGTTTTGTTAGATCAGAGTGGCAACATAACACTGAGTGAGAAAAATGCAACTCCGAACAATAATTCAGCTCGTGGCTTTGATGTAGTTGATAACATTAAGACCTCCCTTGAAAATTCATGCCCTGGTGTCGTTTCTTGTGCGGATATTCTTGCCCTTGCTGCAGAAGCTTCTGTATCTTTGGGAGGAGGTCCTTCATGGAGCGTACTACTTGGTAGAAGGGATGGTCTAATTGCAAACCAATCTGGTGCCAACACCTCTATTCCCACTCCATTTGAAAGCCTAGCTAACATCTCAGCCAAATTTGCTGCCGTTGGCCTAAACACAACTGATCTCGTTGCATTATCTGGTGCACATACATTTGGTCGTGCACAATGTCGATTTTTCAACCAGAGGCTGTTCAATCTTAGTGGCACAGGTAGCCCTGATCCTACACTGAACTCAACATATCTGGCTACTCTGCAGCAAAATTGTCCACAAAATGGAAATGGGACCACTCTCAACAACCTTGACCCTTCATCCCCAAATACTTTTGACAACAATTACTTCAAAAATCTTCTTAACAATCAGGGCCTTCTCCAATCAGATCAAGAGCTATTTTCCACTAATGGCTCTGCTACAATCTCCATTGTTAACAACTTTTCCAGCAACCAGAGTGCCTTCTTCCTAGCCTTTGCTCAGTCCATGATTAATATGGGTAATATTAGCCCATTGACAGGAAATCAAGGAGAAATCAGATCCAATTGTAGGAAAGTCAATGGAAGTTGA	999	0.4264	MLCSTPYSLLATIIFSALILLHPSNAQLSSTFYSNTCPNVSSIVTSVIQQALQSDPRIGASLTRLHFHDCFVNGCDASVLLDQSGNITLSEKNATPNNNSARGFDVVDNIKTSLENSCPGVVSCADILALAAEASVSLGGGPSWSVLLGRRDGLIANQSGANTSIPTPFESLANISAKFAAVGLNTTDLVALSGAHTFGRAQCRFFNQRLFNLSGTGSPDPTLNSTYLATLQQNCPQNGNGTTLNNLDPSSPNTFDNNYFKNLLNNQGLLQSDQELFSTNGSATISIVNNFSSNQSAFFLAFAQSMINMGNISPLTGNQGEIRSNCRKVNGS	332

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi383g00030	332	FunFam	Peroxidase	166	309	-	-
	Sebi383g00030	332	SUPERFAMILY	Heme-dependent peroxidases	27	330	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
	Sebi383g00030	332	Pfam	Peroxidase	45	293	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Sebi383g00030	332	PANTHER	PEROXIDASE 72-RELATED	22	329	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Sebi383g00030	332	CDD	secretory_peroxidase	27	329	IPR033905	GO:0004601\|GO:0042744
	Sebi383g00030	332	PRINTS	Haem peroxidase superfamily signature	122	139	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Sebi383g00030	332	PRINTS	Haem peroxidase superfamily signature	248	263	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Sebi383g00030	332	PRINTS	Haem peroxidase superfamily signature	188	203	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Sebi383g00030	332	PRINTS	Haem peroxidase superfamily signature	59	73	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Sebi383g00030	332	PRINTS	Haem peroxidase superfamily signature	140	152	IPR002016	GO:0004601\|GO:0006979\|GO:0020037

Showing 1 to 10 of 24 entries

Previous1 2 3Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi383g00030	Sebi-Chr383	515603	517466	Dispersed/Wgd

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sebi383g00030	24	332	Peroxidase	AT5G06720	76.052	3.77e-171	477

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi383g00030	K00430		-	gmx:100810355	577.785

Showing 1 to 1 of 1 entries