Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi383g00025 ATGGGACAGAAGGATGCATATGTTGGTGATGAGGCTCAATCAAAGAGAGGTATTTTGACACTGAAATACCCCATTGAGCATGGTATTGTCAGTAATTGGGATGACATGGAGAAGATCTGGCATCACACTTTCTACAATGAGCTCCGTGTGGCTCCAGAAGAGCATCCTAAAACTTCCAAGACCAGCTCAGCTGTTGAGAAGAGCGAGCTACCTGATGGGCAGGTGATCACAATCGGTGCTGAAAGATTCCGCTGCCCTGAGGTTCTATTCCAGCCGTCCATGATAGGGATGGAATCTCCTGGTATCCATGAGACAACATATAACTCGATCATGAAGTGTGATGTCGACATTAGGAAGGATCTCTATGGTAATATTGTATTGAGTGGTGGTTCCACAATGTTCCCTGGTATTGCTGATAGGATGAGCAAGGAGATCACAGCATGGCACCAAGTAGCATGA 459 0.4597 MGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPKTSKTSSAVEKSELPDGQVITIGAERFRCPEVLFQPSMIGMESPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITAWHQVA 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi383g00025 152 PRINTS Actin signature 3 14 IPR004000 -
Sebi383g00025 152 PRINTS Actin signature 15 37 IPR004000 -
Sebi383g00025 152 SUPERFAMILY Actin-like ATPase domain 30 151 IPR043129 -
Sebi383g00025 152 Gene3D - 3 56 - -
Sebi383g00025 152 Gene3D - 100 147 - -
Sebi383g00025 152 SMART actin_3 1 151 IPR004000 -
Sebi383g00025 152 Pfam Actin 60 147 IPR004000 -
Sebi383g00025 152 Pfam Actin 4 56 IPR004000 -
Sebi383g00025 152 ProSitePatterns Actins signature 1. 7 17 IPR004001 -
Sebi383g00025 152 PANTHER ACTIN 5 56 IPR004000 -
Sebi383g00025 152 FunFam Actin, alpha skeletal muscle 1 97 - -
Sebi383g00025 152 Gene3D Actin; Chain A, domain 4 59 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi383g00025 Sebi-Chr383 420808 421932 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi383g00025 1 56 Cytoskeleton Gene Families AT5G09810 100.000 3.09e-36 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi383g00025 K10355 - csem:103398003 203.371