Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi383g00012 ATGAATGAGAACACGGTTGATTACCTTGGAGTGATTCAAGTTCAACATAGTCATGAACTAAATGGAGATTTTAATTCTGAGCTTGGAAATCGTTCTTGTCAATATTTTGATACCAGACAAGCTTGGAATATGGGGTCATACATTCAACCACATGCCATGGCTGGAGGAGGAGCAGAACAGTTACCAAACATAGACTCTGGCAAATCATCTAACACTATTATGCAAAATTTTGAGTCACCAGCTTCTGCCTTTTATGCAGCAGAACACTGCATGGGATTCTCAGAATATGATTGCCAAGTTGGTACTAAGTTCCTTTCAATTGAACAACAAGAGTTGTTAATTGATGGTATTGCCTCAGTTAGAAGGAGCTCATCAATTCCTAACAAAGGAAATCAGGATTATACTGTTGCTTGTGGATCTTATAATTTACCTTTTGCACATCTAAGCTTCTCTTCTCAGCATGAGAAGTTGTCTCCAAAATTTTCAGCAGGAAGTGTGTCAACTACTTTTGGAAATTCTGCTTCTAATGGAACAGTAATCTCAAGTAAAACACGTATAAGATGGACTAATGATCTTCATGAGAAGTTTGTTGAGTGTGTGAATCGCCTTGGGGGTGTTGAGAAGGCAACACCAAAAGCTATATTGAAGATGATGGACTCAGATGGTTTGACCATCTTTCATGTCAAAAGTCATTTGCAGAAATATAGAATTGCCAAGTTCATGCCAGATCCAGCTCAAGTTATCAGTTTCACTTCCCATACTAAACCTAAAAAGTGTCCTGTTTCAGGGAAATCTGACAAAAGGATCCATACAGAGGATGTGCAGCCTCTTGGTGTCAAAACTGGCTTACAAATTAGAGAGGCACTTCAGCTGCAATTAGATGCTCAAAGGCGTCTTCATGAACAGCTAGAGATTCAGAGAACATTGCAGTTGAGAATTGAGGAACAAGGCAGGCAGCTGAAAAAAATGTTTGACCAGCAGCAGAGGACAAGTCATAACCTCTTGACAGCCAATGATGATACAACAATTAGTCATAAATCTGTTGAGGTTTCTATTTCTGAAGGGGCTGGAAATTCCTTCTTCCCTTCATAG 1092 0.3938 MNENTVDYLGVIQVQHSHELNGDFNSELGNRSCQYFDTRQAWNMGSYIQPHAMAGGGAEQLPNIDSGKSSNTIMQNFESPASAFYAAEHCMGFSEYDCQVGTKFLSIEQQELLIDGIASVRRSSSIPNKGNQDYTVACGSYNLPFAHLSFSSQHEKLSPKFSAGSVSTTFGNSASNGTVISSKTRIRWTNDLHEKFVECVNRLGGVEKATPKAILKMMDSDGLTIFHVKSHLQKYRIAKFMPDPAQVISFTSHTKPKKCPVSGKSDKRIHTEDVQPLGVKTGLQIREALQLQLDAQRRLHEQLEIQRTLQLRIEEQGRQLKKMFDQQQRTSHNLLTANDDTTISHKSVEVSISEGAGNSFFPS 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi383g00012 363 Coils Coil 286 306 - -
Sebi383g00012 363 Gene3D - 182 241 - -
Sebi383g00012 363 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 180 240 IPR017930 -
Sebi383g00012 363 Pfam MYB-CC type transfactor, LHEQLE motif 283 329 IPR025756 -
Sebi383g00012 363 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 176 341 IPR044848 GO:0003700
Sebi383g00012 363 FunFam Myb family transcription factor 182 240 - -
Sebi383g00012 363 NCBIfam myb-like DNA-binding domain, SHAQKYF class 183 238 IPR006447 GO:0003677
Sebi383g00012 363 Pfam Myb-like DNA-binding domain 187 236 IPR001005 -
Sebi383g00012 363 SUPERFAMILY Homeodomain-like 181 237 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi383g00012 Sebi-Chr383 203370 206501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi383g00012 127 333 G2-like Transcription Factor Family AT3G04450 42.995 3.64e-47 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sebi383g00012 Myb_DNA-binding 1.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi383g00012 - - cam:101504038 332.413