Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi381g00044 ATGGGCGTCGATTACTATAAAATCCTTCAGGTAGATCGCGGTGCCAAAGATGATGATCTCAAAAAAGCTTATCGCAAACTTGCCATGAAGTGGCACCCTGACAAGAACCCTAACAACAAAAAAGATGCTGAAGCCAAATTCAAGCAAATCTCAGAAGCCTACGATGTTTTGAGTGATCCCCAAAAGAGAGCGGTGTATGATCAGTATGGTGAGGAGGGATTGAAGGGGCAGGTGCCTCCCCCCGGTGCCGGTGGATTTTCCGGTGGCAGTGATGGCGGTCCGACGATGTTCCGGTTCAACCCGAGAAGTGCAGATGATATATTTTCGGAGTTCTTTGGGTTTTCCAGCCCCTTTGGTGGAATGGGTGACATGGGTGGTCGTGCTGGTGCATCTGGCTTTCCCAGGGGCATGTTTGGGGATGACATTTTCACTTCTTTTAGGAGTGCGGCTGGAGAAGGCTCTGCCAATGTGCCAAGGAAAAGTGCACCCATAGAGAGAACATTGCAATGCAGTTTGGAGGATTTGTACAAAGGGACTACAAAAAAAATGAAGATTTCCAGGGATGTTACTGATGCCAGTGGGAGGCCAACCACAGTAGAGGAAATTCTAACCATTGAGATCAAGCCGGGTTGGAAGAAAGGAACAAAAATAACTTTTCCAGAGAAGGGAAATGAACAGAGAGGAGTTATACCTGCAGACCTTGTTTTTATTATTGATGAGAAGCCTCATAGTGTCTTCAAGAGGGATGGCAATGATCTTGTTGTCACCCAGAAGATATCTCTTGTAGAAGCACTCACAGGTTACACAGCACAGTTGACAACCCTTGATGGTAGGAATCTTAACGTCTCCATCAACTCCATCATTAGTCCAACATATGAAGAAGTTATTAAAGGAGAGGGTATGCCTATTCCTAAGGAACCTTCCAAAAAGGGAAACTTGAGAATCAAGTTTAATATCAAGTTCCCCTCCAGACTTACATCTGAGCAGAAAACTGGCGTTAAGCGATTATTGACATCTTCGTAA 1023 0.4516 MGVDYYKILQVDRGAKDDDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQVPPPGAGGFSGGSDGGPTMFRFNPRSADDIFSEFFGFSSPFGGMGDMGGRAGASGFPRGMFGDDIFTSFRSAAGEGSANVPRKSAPIERTLQCSLEDLYKGTTKKMKISRDVTDASGRPTTVEEILTIEIKPGWKKGTKITFPEKGNEQRGVIPADLVFIIDEKPHSVFKRDGNDLVVTQKISLVEALTGYTAQLTTLDGRNLNVSINSIISPTYEEVIKGEGMPIPKEPSKKGNLRIKFNIKFPSRLTSEQKTGVKRLLTSS 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi381g00044 340 SMART dnaj_3 3 62 IPR001623 -
Sebi381g00044 340 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 337 - -
Sebi381g00044 340 Gene3D - 163 241 - -
Sebi381g00044 340 CDD DnaJ 4 59 IPR001623 -
Sebi381g00044 340 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Sebi381g00044 340 FunFam DnaJ subfamily B member 13 243 323 - -
Sebi381g00044 340 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Sebi381g00044 340 MobiDBLite consensus disorder prediction 72 96 - -
Sebi381g00044 340 PRINTS DnaJ domain signature 6 24 IPR001623 -
Sebi381g00044 340 PRINTS DnaJ domain signature 24 39 IPR001623 -
Sebi381g00044 340 PRINTS DnaJ domain signature 42 62 IPR001623 -
Sebi381g00044 340 PRINTS DnaJ domain signature 62 81 IPR001623 -
Sebi381g00044 340 Gene3D - 243 323 - -
Sebi381g00044 340 Gene3D DnaJ domain 3 123 IPR036869 -
Sebi381g00044 340 FunFam Dnaj homolog subfamily b member 160 241 - -
Sebi381g00044 340 SUPERFAMILY HSP40/DnaJ peptide-binding domain 164 243 IPR008971 GO:0006457|GO:0051082
Sebi381g00044 340 SUPERFAMILY Chaperone J-domain 3 97 IPR036869 -
Sebi381g00044 340 Pfam DnaJ domain 4 67 IPR001623 -
Sebi381g00044 340 FunFam DnaJ subfamily B member 13 3 122 - -
Sebi381g00044 340 Pfam DnaJ C terminal domain 164 322 IPR002939 -
Sebi381g00044 340 CDD DnaJ_C 162 325 - -
Sebi381g00044 340 SUPERFAMILY HSP40/DnaJ peptide-binding domain 245 330 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi381g00044 Sebi-Chr381 731064 735778 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi381g00044 5 69 C2H2 Transcription Factor Family AT1G74250 36.232 3.38e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi381g00044 K09510 - gmx:100777607 583.178