Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi381g00036 ATGGGTTCTCGAATTCACCAGCAGGAACCATGGCTGTTGGAGAATGGCAATCTCAAAGGCTTGACCAAAGAGATGAGACATGGCAGAACCGCACATAACATGTCATCTTCTTCTTTGCGCAAGAAATCTGACCTCACTCTTGTCTCCAACCTTCGTTCTGGTTTCCTAAAAAATGTCCTCGTTAACTTCCAAGAGGTTATTCTCGGAACCAAGCTTTCCATTCTCTTCCCAGCCATTCCATTTGCCATCATTGCTCAATGCTATGGCTTTGCCCAACCTTGGGTTTTTGCTTTGAGCTTACTTGGACTTACCCCACTTGCTGAACGAGTCAGCTTCTTGACAGAACAGGTTGCTTATTACACAGGTTCCACAGTGGGAGGACTTTTGAATGCAACATGTGGGAATGCTACTGAGCTCATCATTGCAATTTTTGCCCTTAGCAATAACAAAATTGCTGTGGTCAAGTATTCTCTCCTGGGTTCTATCCTTTCCAACCTTCTTCTAGTTCTTGGAACCTCTCTATTATGTGGTGGCCTTGCAAACCTTAGACAAGAACAAAAATATGATAGGAGACAGGCAGATATGAACTTGCTTATGCTTCTTCTGGCATTTTTGTGTCACTTGCTTCCAATTCTGTTCCAATATGGAGGAGGTGCCTCAGCAGCTGTCACTGCAGACTCATCTCTGCAGTTATCAAGAGTTGCTAGCATCGTGATGGTGATTGCATATATTGCTTACCTTATCTTCCAACTGTGGACTCACCGACAATTATTTGAAGCCCAGGATGAAGATGATGAAGAGGGTGACAATGCTTCAGAAGAAGCAGTAATAGGATTTTGGAGTGGATTTGCTTGGCTGGTTGGGATGACTGTGTTTATTGCTTTGCTATCTGAATATGTGGTGGAGACAATTGAGGATGCATCAGATTCATGGGGTCTGTCTGTCAGTTTCCTCAGCATAATTTTGCTACCAATAGTTGGAAATGCAGCTGAACATGCAGGAGCTATCATATTTGCTTTCAAGAACAAGCTGGACATATCATTGGGTGTTGCTTTGGGTTCTGCAACTCAAATTGGCATGTTTGTGGTTCCCCTATGTGTGATTGTTGCATGGATTCTGGGTCTCAAAATGGACCTCAACTTCAACCTCCTAGAGACAGGTTCTCTTGCTTTGGCAATAATAACCACAGCCTTCACATTACAGGATGGAACTTCTCACTACATGAAAGGCCTTGTTCTCCTGCTTTGCTACATTGTTATTGGGGCCTGCTTTTTTGTACAAAGAACACCCTCCAGCAATCAAGTTGATATTACTAACGTAATGCTTAAACCAGCAAATGTTGCAGATTTTAGAGCTTAA 1359 0.4297 MGSRIHQQEPWLLENGNLKGLTKEMRHGRTAHNMSSSSLRKKSDLTLVSNLRSGFLKNVLVNFQEVILGTKLSILFPAIPFAIIAQCYGFAQPWVFALSLLGLTPLAERVSFLTEQVAYYTGSTVGGLLNATCGNATELIIAIFALSNNKIAVVKYSLLGSILSNLLLVLGTSLLCGGLANLRQEQKYDRRQADMNLLMLLLAFLCHLLPILFQYGGGASAAVTADSSLQLSRVASIVMVIAYIAYLIFQLWTHRQLFEAQDEDDEEGDNASEEAVIGFWSGFAWLVGMTVFIALLSEYVVETIEDASDSWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIGMFVVPLCVIVAWILGLKMDLNFNLLETGSLALAIITTAFTLQDGTSHYMKGLVLLLCYIVIGACFFVQRTPSSNQVDITNVMLKPANVADFRA 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi381g00036 452 NCBIfam calcium/proton exchanger 77 425 IPR004798 GO:0006816|GO:0015369
Sebi381g00036 452 NCBIfam calcium/proton exchanger 57 425 - -
Sebi381g00036 452 Gene3D - 122 263 IPR044880 -
Sebi381g00036 452 Gene3D - 268 425 IPR044880 -
Sebi381g00036 452 FunFam Vacuolar cation/proton exchanger 270 426 - -
Sebi381g00036 452 FunFam Vacuolar cation/proton exchanger 123 268 - -
Sebi381g00036 452 Pfam Sodium/calcium exchanger protein 282 420 IPR004837 GO:0016020|GO:0055085
Sebi381g00036 452 Pfam Sodium/calcium exchanger protein 93 252 IPR004837 GO:0016020|GO:0055085
Sebi381g00036 452 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 26 429 IPR004713 GO:0006812|GO:0008324|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi381g00036 Sebi-Chr381 649309 652172 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi381g00036 9 435 Antiporters AT2G38170 73.333 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi381g00036 K07300 - gmx:100782052 683.715