Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi381g00015 ATGATGTTTGTTCCAGAAAATGAGGATAGAATTGAGGCCAATGATGGGCCTGCATTTCGTGAATTTATGCTGGAGCAACTTAATAATGCAACATCTGGTTTTGCTGTTGAGAATATTGTATCTGAACATGGAGAGAAGGCTCCAAATGTTGTTTATAAAGGAAAGATGGAGAATCAAATGAGGATTGTTGTTAAGCGGTTTGATAGAAATGCTTGGCCTGATGCTCGACAGTTTTTGGAGGAAGCTAGATCCGTTTGTCAGCTTCGTAACCAAAGATTGGCAAATTTGCTTGGTTGTTGTTGTGAAGGCGATGAGAGATTGCTTGTGACCAAATATATGCCCAATGAAACACTAGCAAAACACCTTTTCCATTCTCTAGAATACTGCACAAGCAAAAGGCGTGCCCTCTATCATGACCTTAATGCATATAGAGTTTTATTTGATGAGGATGGTAATCCTAGGCTTTCAAGTTTTGGTCTTATGAAGAATAGTAGGGATGGGAAAGGTTATAGCAAAAATTTGGCGTTTACCCCTCCAGAATATCTCAGAACTGGTGTTCCATTTTTCTTTGATGTTATGGCTTTATTTTAA 591 0.3858 MMFVPENEDRIEANDGPAFREFMLEQLNNATSGFAVENIVSEHGEKAPNVVYKGKMENQMRIVVKRFDRNAWPDARQFLEEARSVCQLRNQRLANLLGCCCEGDERLLVTKYMPNETLAKHLFHSLEYCTSKRRALYHDLNAYRVLFDEDGNPRLSSFGLMKNSRDGKGYSKNLAFTPPEYLRTGVPFFFDVMALF 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi381g00015 196 Pfam Protein tyrosine and serine/threonine kinase 50 124 IPR001245 GO:0004672|GO:0006468
Sebi381g00015 196 ProSiteProfiles Protein kinase domain profile. 1 196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi381g00015 196 Gene3D Transferase(Phosphotransferase) domain 1 113 189 - -
Sebi381g00015 196 SUPERFAMILY Protein kinase-like (PK-like) 19 185 IPR011009 -
Sebi381g00015 196 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 7 124 IPR045845 GO:0004672|GO:0009742
Sebi381g00015 196 Gene3D Phosphorylase Kinase; domain 1 8 112 - -
Sebi381g00015 196 FunFam probable serine/threonine-protein kinase At4g35230 9 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi381g00015 Sebi-Chr381 337863 340058 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi381g00015 7 185 Glycoside Hydrolase AT3G07070 31.905 7.51e-21 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Sebi381g00015 PK_Tyr_Ser-Thr 4.8e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi381g00015 K14500 - gmx:100781311 316.235