Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi381g00004 ATGACCGTTTCTTACTCTGGTCACCAAATTCCCCTGGCCGCCGTCCAGGTCACCGAGCTCGCCGACGGCGTTTTCGTCGGCTGCACCGTCAACCACTCCGTCACCGACGGTACCTCCTTCTGGCACTTCTTCAACACCTTCGCCGCCGCCGCCAAGAGCGGCGGCGCGAAGAAGATCACGAAGTCGCCGGACTTCACCCGTGACACCGTCTTCAACTCTGAAACCGTCCTCCCCGTCCCCGCCGGCGGTCCCGCCGTCACCTTCGACGTCGACGCACCTCTCCGGGAGCGAGTCTTTCACTTCTCCCGCGAAGCCATTCAGAAACTCAAACAGAGAGCCAACGGCAACGGAATCCCGGATTTCGCGGAAGTAATAGGTAAACAGGTGAATGACGGTTGGAAAGTCGTTAACTGTAATGGTAACGGAAAGACAACTCCCGTTGCTAACGGTAACGGAAGAAACGAGATCTCGTCGTTTCAATCCTTGTCCGCTCAACTATGGCGTTCAGTGACGCGTGCCAGGAAATTGGACCCTTCGAAAACGTCGACGTTTCGCATGGCCGTGAATTGCCGTCACAGGTTGGAACCAAGGATTGACCCGTTTTACTTCGGCAATGCGATTCAGAGCATCCCAACCGTTGCTACTGCGGCTGACATAATCTCTCGCGATCTACGCTTCTGCGCAGAATTGCTTCATCAAAACGTCGTCGCACACGACGACGCTACGGTGCGCCGCGGCATACAGGATTGGGAGAAGGCACCGAGACTGTTCCCGCTTGGGAATTTCGACGGCGCAATGATCACCATGGGTAGCTCCCCGCGTTTTCCCATGTACGACAACGACTTCGGGTGGGGCCGGCCCTTGGCCATTCGAAGTGGCAAGGCGAACAAGTTTGACGGCAAGATCTCTGCGTTTCCTGGAAGAGAAGGAAACGGCAGCGTTGATCTTGAGGTTGTTTTGGCCCCTGAAACGATGGCTGGGCTCGAAAACGACATGGAGTTTATGCAGTACGTGACGCCAACCGAAGTGTGTGTGGTATAA 1041 0.56 MTVSYSGHQIPLAAVQVTELADGVFVGCTVNHSVTDGTSFWHFFNTFAAAAKSGGAKKITKSPDFTRDTVFNSETVLPVPAGGPAVTFDVDAPLRERVFHFSREAIQKLKQRANGNGIPDFAEVIGKQVNDGWKVVNCNGNGKTTPVANGNGRNEISSFQSLSAQLWRSVTRARKLDPSKTSTFRMAVNCRHRLEPRIDPFYFGNAIQSIPTVATAADIISRDLRFCAELLHQNVVAHDDATVRRGIQDWEKAPRLFPLGNFDGAMITMGSSPRFPMYDNDFGWGRPLAIRSGKANKFDGKISAFPGREGNGSVDLEVVLAPETMAGLENDMEFMQYVTPTEVCVV 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi381g00004 346 Gene3D - 83 331 IPR023213 -
Sebi381g00004 346 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 2 336 - -
Sebi381g00004 346 Pfam Transferase family 2 335 - -
Sebi381g00004 346 Gene3D - 2 78 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi381g00004 Sebi-Chr381 67357 68397 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi381g00004 8 330 Monolignol Biosynthesis Gene Families AT5G48930 27.190 1.39e-25 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi381g00004 - - gmx:100780358 585.874