Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi380g00034 ATGGGGTTTCATGGCTTGGTTTTGCTATTCTGTTCTGCTTGGTGTATCTTTTATGTGGGTAGTTGCAATGCTCAGTTACAGTCTTCTCAGACCCAAGTGCTTCTCCAGTTGAAAAAGCATTTGGAATACCCAACACAATTGGAAATATGGAAAGATCGTTGGACAGATCTTTGCTCTATGTCTTCTGCACAAGTCAATGTCACATGCAAGGACAATTTTGTCACTGAGCTCATCATCTTGGGTGATAAACCAACCAAAGGTAGAGACTTTGATGGGTTTGCTATTCCAAACCAAACACTATCACAGGGCTTCTCCATGGACTCTTTTGTGGCTACTTTAGCCAGGTTAACTAGCTTGAGAGTTCTTAGTCTTATATCTTTGGGAATTTGGGGACCACTCCCTGGTAGCATTCACAGGCTTTTTACACTTGAACATTTAGATTTGAGTTCAAACTATCTTTATGGATCAATCCCTCCAAAGATTTCCACAATGGTGAAACTTCAAACTCTTAGATTGGGTGATAACTTCTTCAATGATACTATCCCCAGCTTGTTCAATTCATCAAGTAATCTTACAGTTCTTAGTTTGAAGAATAACAAGTTGAAAGGTCCTTTTCCACCTTCAATCCTTAGTATCACTACCCTAACTGAAATTGACATGTCAAGCAATCAAATATCAGGGAGCTTGCAAGATTTTACTGGTTTGAGTAGCTTGGAACAGCTAGATTTAAGGGAAAACAAATTAGACTCTGAATTACCTGCAATGCCAAAAGGGTTGATTAGGCTTTTCCTTAGCAGAAACTCCTTCTCAGGTCAAATTCCCAAACACTATGGTCAACTAAATAGGCTTCAGCAACTTGATATTTCCTTCAATGCACTCACAGGCACTGCTCCTGCTGAAATTTTTTCTTTGCCTAACATCAGTTACTTGAATTTGGCATCAAACATGTTAAGTGGGCCACTCCAAAATCACCTGAGATGTAGCAGCCAACTTAGATTTGTTGACATATCAAACAATAGATTAGTGGGGGCCTTGCCTTCTTCTCTGAACACTGAATCAAAAAATACTAATAGAGTTGTTAAGAGTGATGGAAACTGTTTATCTGGGAATTTGCAGCATCAGCATGCAGTATCCTACTGCACAGAGGCAAATGTGAAGAAGAAATCAAATAGTGTTGGAATTTTTGCTGGTGTCATTGTGGGAATTATTGTAATCATAGTGATTTTGGTTCTGTGCATTGTTGTCACTTGTAAGAAGTACTACACTAGGGGGGTATCAGAGCAACACCTATTGCATAAAACAGTTCAAGATAGCTATGCAGCAGGGATCTCCTCTGAGCTTGTTACTAATGCAAGGTATGTCTCTGAAGCTGCAAAGTTAGGCAAAGAAGACCTACCCACATGTAGGTCATATTCCTTGGAAGAGCTAAAGGAAGCCACAAATAACTTTGACAACTCTAATTTTATGGGTGAAAATATATATGGGAAGCTTTACAGAGGAAAATTGGAGAGTGGGATACCAGTTGCAATAAGGTGCCTACCTTTGTCAAAAAAGTATTCAATTAGGAATTTCAAGCTGAGGTTGGATTTGCTTGCAAAGCTTCGTCACCCGCATTTGGTGTCCCTCTTAGGACACTGCATTGATGGTGTTGTAGGAGAGAACAATGACTCAAATGTCTTTCTCATTTATGAATGTGTATCAAATGGGAGTTTCCAGACTTATCTCTCTGGAGACAAGTCTGGCAAGGTTTTCAATTGGTCAGAGAGATTGTCAGTTCTAATTAGTATTGCTAAAGCTGTCCACTTCCTACACACTGGAATGATTCCTGGTTTCTTCAAAAATAGACTTAAGACAAACAATATTTTGCTCAATGAGAATTGGATGGCAAAGTTGAGTGACTATGGATTGTCCATTATCTCAGAACAAACTGATGCAAGTGGGGTAAAAGGAGAAAGCCCTGATTCATGGCAAATGAAAAGGTTAGAGGATGATGTTTATAGCTTTGGATTCATATTACTGGAGGCACTTGTAGGACCTTCAGCATCTGCTAAAAGAGAAGCAATTGTGCTGAATGAAATGGATGGGTGGAAAGAGATTGTGGACCCAATTGTGCAAGCTACATGCTCTAAAGAATCACTATCTATTGTGATTTCCATAACAAACAAGTGTGTTTCCCCTGAGTCTTGGAGCCGACCATCCATTGAGGATGTCCTTTGGAACTTGCAGTATGCTTCTCAAGTCCAGGCAACAGCTGATGGGGATCAGAGAATTTGA 2274 0.3975 MGFHGLVLLFCSAWCIFYVGSCNAQLQSSQTQVLLQLKKHLEYPTQLEIWKDRWTDLCSMSSAQVNVTCKDNFVTELIILGDKPTKGRDFDGFAIPNQTLSQGFSMDSFVATLARLTSLRVLSLISLGIWGPLPGSIHRLFTLEHLDLSSNYLYGSIPPKISTMVKLQTLRLGDNFFNDTIPSLFNSSSNLTVLSLKNNKLKGPFPPSILSITTLTEIDMSSNQISGSLQDFTGLSSLEQLDLRENKLDSELPAMPKGLIRLFLSRNSFSGQIPKHYGQLNRLQQLDISFNALTGTAPAEIFSLPNISYLNLASNMLSGPLQNHLRCSSQLRFVDISNNRLVGALPSSLNTESKNTNRVVKSDGNCLSGNLQHQHAVSYCTEANVKKKSNSVGIFAGVIVGIIVIIVILVLCIVVTCKKYYTRGVSEQHLLHKTVQDSYAAGISSELVTNARYVSEAAKLGKEDLPTCRSYSLEELKEATNNFDNSNFMGENIYGKLYRGKLESGIPVAIRCLPLSKKYSIRNFKLRLDLLAKLRHPHLVSLLGHCIDGVVGENNDSNVFLIYECVSNGSFQTYLSGDKSGKVFNWSERLSVLISIAKAVHFLHTGMIPGFFKNRLKTNNILLNENWMAKLSDYGLSIISEQTDASGVKGESPDSWQMKRLEDDVYSFGFILLEALVGPSASAKREAIVLNEMDGWKEIVDPIVQATCSKESLSIVISITNKCVSPESWSRPSIEDVLWNLQYASQVQATADGDQRI 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi380g00034 757 Gene3D Transferase(Phosphotransferase) domain 1 566 756 - -
Sebi380g00034 757 Pfam Protein tyrosine and serine/threonine kinase 488 738 IPR001245 GO:0004672|GO:0006468
Sebi380g00034 757 SUPERFAMILY L domain-like 29 351 - -
Sebi380g00034 757 Gene3D Ribonuclease Inhibitor 27 258 IPR032675 -
Sebi380g00034 757 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 27 257 - -
Sebi380g00034 757 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 259 385 - -
Sebi380g00034 757 SUPERFAMILY Protein kinase-like (PK-like) 466 742 IPR011009 -
Sebi380g00034 757 Gene3D Phosphorylase Kinase; domain 1 445 564 - -
Sebi380g00034 757 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 99 741 - -
Sebi380g00034 757 ProSiteProfiles Protein kinase domain profile. 483 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi380g00034 757 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 446 565 - -
Sebi380g00034 757 Pfam Leucine rich repeat 282 341 IPR001611 GO:0005515
Sebi380g00034 757 Pfam Leucine rich repeat 166 225 IPR001611 GO:0005515
Sebi380g00034 757 Gene3D Ribonuclease Inhibitor 259 394 IPR032675 -
Sebi380g00034 757 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 566 757 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi380g00034 Sebi-Chr380 567166 571157 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi380g00034 6 693 Miscellaneous Gene Families AT5G14210 51.558 0.0 663
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Sebi380g00034 PK_Tyr_Ser-Thr 5.7e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi380g00034 - - gmx:100802978 1253.43