Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi380g00022 ATGGTTGGAAGCAATGAATCAATGACAAGTGATACTCTAGAGTTACAGGAACGACAAGCTTCCGTAATCTACTTAGAAGAGGATGAGGAAATCCCCATAGAACATGGTGGCGCATATTTCATTGATGAAGTAGGTGGTGGTGTATTCCTTGTTGATAATGATTGGGATGGTGAACAATCCGGAGAAGATGAACAATGGGATGAGCCTTGTACCGAAATTCCTCGTTTTGGGGATAGGGTCCCTAGATTTAGGATTGATAGTGAGGAGGATATTAAAGGGATGGACTTGAAGGCATTTAGTCCACATGAAATTGAAATGTATGACTTTGGTAGCATGGAATTGGCCTACAAGTTCTATAGTTCTTATGCAATGAGGAATGGGTTTTGTGTTAGGAAATCATCTATTGTGAGAAGCAAAAAAACAAGGGAGCCATATCAGCAAGAGTATGTTTGTAATAGAGCAGGCTTTAGACGGGATAATGGGAAAAGTGTTGAAGATATGAAACGTGAGCCTAGAGTTAATTTTAGATGTGGATGTTCTGCATTATTTCGTGTTCACATTGACTTTGTGACTTCCCGATGGTATTGTACTTGGTTTGATGATGATCACAACCATGATTTGTTGGATCCAATACACTGTGGGATGCTTCCAGCACATAGGAAGATGTCTGCTAGTGAAATAATGCAGATGAATGAAATGATGAAAGTTGGTATTAGTCCCTCTCACATTTATAGGTCATTTGCTTTGCAAGCCGGAGGTTATCAGAAAATTGGTTTTAGGAAAAAGGACTTGTATAACCAGATCCATCGTCAAATGCGTGAGCAATGTTCAGATGCGGTGGAAGCTCTAAAATACTTGAAGGATATTGGAGGGAAGGATGGAAAGCCCGGTTTCACAGCTGAGTTAAAGAAGTGCATGTTGGGTGATTATGATTTGGATGAGTTTAGCCAAGCTTGGGATGAAATGGTCAGCAAGTATCATTTGGAGGACAATCATTGGGTCAATGCACTGTATGAGAAAAGGTCAATGTGGGCTACAGCTCATATCTGGGAGCATATACGATTCAAAGAAAAGGAAGATGACTTCGCATCTCTACATGGGGACTCTGTGCTCCAAACCAAATACCCTTCCATTGAGAAATCTGTTGCAAAATATTTAACGAAGGAGTTGTTCATGAAATGTCGGTACTTTATAAACAAAGCAGCTGACTTTGTTGTAGTTGGTTGTTCAAAAACGCTAACAGTGTCCATTTTCACTGTTTGTAAGCGTGGAGGACGAGGCAAGGAATGGAAAGTGACACATGATGCAGGTAACAATGAATTTAAATGTGATTGCATGAGAATGGAGTCTCGGGGTTTGCCATGTGAACACCTAGTTGCTGTTCTTGTTCACTTGAGGATAAATGATCTTCCTAGGTGTTTTGTTTTGAAATGGTGGTCAAAAGGTGCGAAGGATGGTTTTTATGACCGTAATGGGGATGGAGACACTACATGGAATTCTTCACTGGTTTTTAGAAGTGATGAAGCGATGCATGTATGTAGATTGATTATTAAATTGAACGATACTGCCGAAGAACACCACGAATTTATGGATAAGCTTTTACAAATCTATGAGGAATGCAAGGCTAGGAAATCATGCCTTCATGGGGATGGTAGTTCTTCTAGCAGGTTTGTGGTTGAAAATTTGAGGGATCCTGTATGTGTTAGGACCAAAGGTCGGGGTGGGGGAAAATCCACAACCTTTGGTCTAGCAGTGCGTAGGAGGAAAAAGTGCTCTATATGTAAGGTTCCTGGGCACAATAAGCTAACTTGTCCACACAGTCAAAGACAAGCACCATTGCATGAAAGTGAAGATGATGACATCTATTTCCCTACCCAAGACTTGGACACTGACATGATTCCTGGGCACAACCAGCACACTTGTCCACACAGTCAAAGAGAAGCACCATTGCATGAAAGTGAAGATGATGACATCTATTTCCCTACCCAAGACTTGGACACTGACATGATTCCTGGGCACAACCAGCACACTTGTCCACACAGTCAAAGAGAAGCACCATTGCATGAAAGTGAAGATGATGACATCTATTTCCCTACCCAAGACTTGGACACTGACATGATTCCTGGGCACAACCAGCACACTTGTCCACACAGTCAAAGAGAAGCACCATTGCATGAAAGTGAAGATGATGACATCTATTTGCCTACCCAAGACTTGGACACTGACATGATTGGTAGTCATATGTCAATGTGA 2253 0.415 MVGSNESMTSDTLELQERQASVIYLEEDEEIPIEHGGAYFIDEVGGGVFLVDNDWDGEQSGEDEQWDEPCTEIPRFGDRVPRFRIDSEEDIKGMDLKAFSPHEIEMYDFGSMELAYKFYSSYAMRNGFCVRKSSIVRSKKTREPYQQEYVCNRAGFRRDNGKSVEDMKREPRVNFRCGCSALFRVHIDFVTSRWYCTWFDDDHNHDLLDPIHCGMLPAHRKMSASEIMQMNEMMKVGISPSHIYRSFALQAGGYQKIGFRKKDLYNQIHRQMREQCSDAVEALKYLKDIGGKDGKPGFTAELKKCMLGDYDLDEFSQAWDEMVSKYHLEDNHWVNALYEKRSMWATAHIWEHIRFKEKEDDFASLHGDSVLQTKYPSIEKSVAKYLTKELFMKCRYFINKAADFVVVGCSKTLTVSIFTVCKRGGRGKEWKVTHDAGNNEFKCDCMRMESRGLPCEHLVAVLVHLRINDLPRCFVLKWWSKGAKDGFYDRNGDGDTTWNSSLVFRSDEAMHVCRLIIKLNDTAEEHHEFMDKLLQIYEECKARKSCLHGDGSSSSRFVVENLRDPVCVRTKGRGGGKSTTFGLAVRRRKKCSICKVPGHNKLTCPHSQRQAPLHESEDDDIYFPTQDLDTDMIPGHNQHTCPHSQREAPLHESEDDDIYFPTQDLDTDMIPGHNQHTCPHSQREAPLHESEDDDIYFPTQDLDTDMIPGHNQHTCPHSQREAPLHESEDDDIYLPTQDLDTDMIGSHMSM 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi380g00022 750 PANTHER OS01G0519700 PROTEIN 298 643 - -
Sebi380g00022 750 Pfam FAR1 DNA-binding domain 117 208 IPR004330 -
Sebi380g00022 750 ProSiteProfiles Zinc finger SWIM-type profile. 430 466 IPR007527 GO:0008270
Sebi380g00022 750 SMART 26again6 441 468 IPR006564 GO:0008270
Sebi380g00022 750 MobiDBLite consensus disorder prediction 708 728 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi380g00022 Sebi-Chr380 334939 338351 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi380g00022 FAR1 7e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi380g00022 - - ahf:112708893 231.876