Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi380g00004 ATGTTGAGGATGATGCCCGAATGTCGCCACTACTTTCACCTCTGTTGCCTTGACTCATGGTTGAAGCTCAATGGCTCATGCCCTGTTTGCCGTAATTCGCCTTTGCCGACGCCCATTTCTACGCCGTTGCAAGAAGTGGTGCCGCTCTCTCACTATCCTGCTGATAGAAGGGCAAGGAGGTGA 183 0.5246 MLRMMPECRHYFHLCCLDSWLKLNGSCPVCRNSPLPTPISTPLQEVVPLSHYPADRRARR 60
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi380g00004 60 Pfam RING-H2 zinc finger domain 6 31 IPR024766 GO:0008270
Sebi380g00004 60 PANTHER RING-H2 FINGER PROTEIN ATL67 1 59 IPR044289 GO:0016567|GO:0016740
Sebi380g00004 60 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 35 IPR013083 -
Sebi380g00004 60 ProSiteProfiles Zinc finger RING-type profile. 7 31 IPR001841 -
Sebi380g00004 60 SUPERFAMILY RING/U-box 2 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi380g00004 Sebi-Chr380 111332 111514 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi380g00004 1 57 C3H Transcription Factor Family AT2G35910 63.158 2.24e-21 80.5