Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi37g00037 ATGCATCCCAAACGGTCTAGCCAAGATGGCCTTGTTTCTGGGCCAGTGCGCACGAGTGACAGAATCAAGGCAAGGCCAAATGCGTATAGCCGAACATACTTTTATTACAATTCAAATATTAGGCACAATAGAAAAAGAAAGAACAAGACAAGGACAGCAGCTTCACAGATTGCTAAGTTGTTGCGTCCAGGAAATCAGAAAGCACGGGATTCAAATACTAATTCTGGCTCTGCCAACCTTCGGCGTTCAACTAGGAAGAGAAGGGCTAATTTAAATCTTCAAGATTTCATAGACAGCTCTGGAGCTGAGGATGAAGACTTAATGAGACCCAGATATCGACCATTGAGACACCAGATTAACAATAGTGTCAATCGGGATGGTTTAATGTCTTCCAAGCGCAAAAGAGCGGTGGAGACTAAATCAACACCTCGACGTGAAGGTCTACGACCTCGTCGTTCAAGGGCTGCTGCAAGAGAACAAATAATTTCAGAATCGGATGATGAGCAAGACCTTTCAGAAGAGAAGGTTGAACAAGATGAAACAGAACATGGAAATGATGTTGAGGAAAATGATGCAGATGAGGGTCAAAATGAGATCGAGGGGGATGTTGAGGGCGAAGATGAAGGTGAGGATGAAGGTGATGAAGATGGTGATGATGAAGAGGGTGAAGAAGAGCAGGATGGTAGAAGGCGCTACGATCTTCGAAATCGTTCAGATGTCCGCAGGATCTCTATGGAGGAAGGGAAAACCCGGCCAAGATCTCCTCGAAGAGTGTTACATCAAGGTATGGGAACTAAGGTCAACAGGGATGTAAGGAAGGGTGGATCACGAGTTCATAAGCGTCATCGCTTAGCAAGGCCTGAAGATTCTGATGACTCCCTTCTTGTGGATGAGTTGGACCAAGGCCCTGCAATTCCATGGGGGCGAGGTGGCAGCAGATCTGGCCCGCCTTGGCTTTTTGGGGGTGTAGACATGCATGGAACAGCGGCTTGGGGATTAAATCTTGCTGCATCAGGTTGGGGCCATCAAGGTGATGCTTTGGCTACTCTAACTTCTGGGATTCAAACTGCTGGGCCAAGCTCTAAGGGAGGGGCAGATATCCAACCCTTACAGGTTGATGATAGTGTTAGCTTTGATGATATAGGTGGGCTCTCTGAATACATTGATGCTCTAAAGGAAATGGTTTTCTTTCCATTATTGTATCCAGATTTTTTTGCAAGTTACCACATAACTCCACCTAGGGGGGTGTTGTTATGTGGGCCCCCTGGCACGGGGAAAACGTTAATTGCAAGAGCTTTGGCTTGTGCTGCTTCAAAAGCTGGCCAAAAGGTTAGCTTTTACATGCGCAAAGGAGCAGATGTGCTAAGCAAGTGGGTTGGTGAGGCTGAAAGACAATTGAAACTACTCTTTGAGGAAGCACAAAGGAATCAACCTTCAATTATCTTCTTTGATGAAATAGATGGACTAGCACCTGTGAGGTCTAGTAAGCAAGAGCAAATTCACAATTCCATTGTATCCACTTTGCTTGCTTTGATGGATGGTCTTGATTCTCGTGGACAAGTTGTTTTAATTGGAGCTACCAACAGGATTGATGCTATTGACGGAGCCTTGCGACGTCCTGGTAGATTTGATCGTGAATTTAACTTTCCCTTGCCTGGTTGTGAGGCACGTGCTGAAATATTAGACATTCATACTCGTAAGTGGAAGCATCCTCCTCCAGAGGAACTGAAAAAGGAACTTGCAGCTAGTTGTGTAGGTTATTGTGGTGCTGATCTAAAGGCTCTCTGTACTGAAGCTGCCATTCGTGCTTTCCGTGAAAAATATCCACAGGTTTATACAAGTGATGACAAATTTCTCATAGATGTTGATTCTATCAGGGTAGAAAAGTATCATTTTATTGAAGCAATGTCTACAATTACTCCTGCTGCTCATAGGGGAGCTATTGTGCACTCTAGGCCATTGTCTCTAGTAGTTCAACCCTGTCTTCAGAGACATCTAGAGAAAGCCATGAGTATTATATCTGATATTTTCCATCCAGTATCTGTTGCATCAGAATTGACCAAACTTTCTATGCTTTCATACGGGTCTGCAATTCCACTTGTGTATCGGCCTAGGCTTCTACTTTGTGGTGGTGAAGGTACAGGGTTGGATCATCTTGGACCTGCGGTTTTACATGAACTTGAAAAATTTCCTGTACATTCGTTAGGACTTCCATCTCTTCTATCAGATCCTAGCGCAAAGACACCAGAGGAGGCATTGGTGCACATATTTGGTGAAGCGAGAAGAACAACACCATCAATTCTCTATTTACCGCAGTTTGTTGTTTGGTGGGAAACTGCTCATGAACAGCTCAGAGCTGTTCTCCTGACTCTGCTAGAAGAATTGCCTTCTGACTTACCTATCTTACTACTCGGGACATCCTCAGTTGCACCTGCTGAAGTTGAGGAAGTGCCTACTTCAGTTTTTCCTCATCACTCAGTTTATGAAGTGAACATGCCATCTACCAAAGATAGGACTTTGTTTTTTGACCGTTTAATAGAAGCTGCTCTGTCGGTATTGTTGGAGGGAATGAGCAGGAAATCCCAGGATACAGGATGTCTTTCTGAACTTCCTAAGGCACCAAAATTGGCAAGTGGTCCAAAGGTATCTGAGCTAAAAGCAAAGGTGGAAGCCGAGCAACATGCACTTCGTAGATTGCGAATGTGCCTTAGAGATGTTTGCAACCGGATATTATATGACAAGCGATTTAATGCCTTCCATTATCCAGTCTCAGATGAAGATGCACCTAATTATCGCTCAATTATACAGAACCCAATGGACATGGCTACTGTCCTGCAGCATGTTGATAATGGCCACTATATTACATCTGCTGCATTCCTGCAGGACATTGATCTCATTGTTTCCAATGCAAAGGCTTACAATGGAGATGACTACAATGGTGCTAGGATTGTCAGTAGAGCTTGTGAGCTCCGTGATGCGGTGCATGGGATGCTCTCACAGATGGATCCAGCACTGGCTGCATACTGTGACAAGATTGCTAGTCAAGGTGGCCCAGTTCATTTTCCTGATGAATTAGGGGATTCTACATTCCCTGCTACTCCTGTTGTACAGCTGGGTACTGCTACTAGAATGAGTGCTCGACTTCGTCATGTCCAACCAGAGGTTAATATGGATCAGAGTTATGAAGCATTGAAGCGGACTAAGAAGATCGGTGATGTGCATGCAGAAGACAAATCACAAGATTCAATACCTGCAAAGTCCTCCCAGGAGCATCAGGCAAATGAAATGAATTCTGAAAGGCTGGAACCTGTAGAAGTTGATGGAAACTTGCATGGAACTTGTACAAATAGCCTTGCTGATGGCAGTAGCCTTCATGATGTTGCAATGCTAGATGGTGAATTTTCAAGACAAGTGGAGTCGATCAAGCAGCATTTTGTTAAGCGTAGTGAAAATTACAGCATTCCACAACTTGAAAGGCTTTACACGAGAATTATGAAGGGCGTGTTTGAAACTAAGGATAAAGGAATGAATGGTGAACTGACTTCGATTTTGAGCTTTTTGTTCAAATTTGTAGAGGATGATGCAAATTTCTGA 3594 0.4405 MHPKRSSQDGLVSGPVRTSDRIKARPNAYSRTYFYYNSNIRHNRKRKNKTRTAASQIAKLLRPGNQKARDSNTNSGSANLRRSTRKRRANLNLQDFIDSSGAEDEDLMRPRYRPLRHQINNSVNRDGLMSSKRKRAVETKSTPRREGLRPRRSRAAAREQIISESDDEQDLSEEKVEQDETEHGNDVEENDADEGQNEIEGDVEGEDEGEDEGDEDGDDEEGEEEQDGRRRYDLRNRSDVRRISMEEGKTRPRSPRRVLHQGMGTKVNRDVRKGGSRVHKRHRLARPEDSDDSLLVDELDQGPAIPWGRGGSRSGPPWLFGGVDMHGTAAWGLNLAASGWGHQGDALATLTSGIQTAGPSSKGGADIQPLQVDDSVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRIDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKHPPPEELKKELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSDDKFLIDVDSIRVEKYHFIEAMSTITPAAHRGAIVHSRPLSLVVQPCLQRHLEKAMSIISDIFHPVSVASELTKLSMLSYGSAIPLVYRPRLLLCGGEGTGLDHLGPAVLHELEKFPVHSLGLPSLLSDPSAKTPEEALVHIFGEARRTTPSILYLPQFVVWWETAHEQLRAVLLTLLEELPSDLPILLLGTSSVAPAEVEEVPTSVFPHHSVYEVNMPSTKDRTLFFDRLIEAALSVLLEGMSRKSQDTGCLSELPKAPKLASGPKVSELKAKVEAEQHALRRLRMCLRDVCNRILYDKRFNAFHYPVSDEDAPNYRSIIQNPMDMATVLQHVDNGHYITSAAFLQDIDLIVSNAKAYNGDDYNGARIVSRACELRDAVHGMLSQMDPALAAYCDKIASQGGPVHFPDELGDSTFPATPVVQLGTATRMSARLRHVQPEVNMDQSYEALKRTKKIGDVHAEDKSQDSIPAKSSQEHQANEMNSERLEPVEVDGNLHGTCTNSLADGSSLHDVAMLDGEFSRQVESIKQHFVKRSENYSIPQLERLYTRIMKGVFETKDKGMNGELTSILSFLFKFVEDDANF 1197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi37g00037 1197 MobiDBLite consensus disorder prediction 224 254 - -
Sebi37g00037 1197 FunFam ATPase family AAA domain-containing protein 888 1016 - -
Sebi37g00037 1197 CDD RecA-like_Yta7-like 380 549 - -
Sebi37g00037 1197 MobiDBLite consensus disorder prediction 268 291 - -
Sebi37g00037 1197 PRINTS Bromodomain signature 944 962 IPR001487 GO:0005515
Sebi37g00037 1197 PRINTS Bromodomain signature 928 944 IPR001487 GO:0005515
Sebi37g00037 1197 PRINTS Bromodomain signature 962 981 IPR001487 GO:0005515
Sebi37g00037 1197 CDD Bromo_AAA 896 1005 - -
Sebi37g00037 1197 MobiDBLite consensus disorder prediction 183 223 - -
Sebi37g00037 1197 SUPERFAMILY Bromodomain 894 1007 IPR036427 GO:0005515
Sebi37g00037 1197 Pfam Bromodomain 909 977 IPR001487 GO:0005515
Sebi37g00037 1197 Pfam AAA+ lid domain 578 615 IPR041569 -
Sebi37g00037 1197 Gene3D - 888 1016 IPR036427 GO:0005515
Sebi37g00037 1197 Gene3D - 552 637 - -
Sebi37g00037 1197 MobiDBLite consensus disorder prediction 128 165 - -
Sebi37g00037 1197 MobiDBLite consensus disorder prediction 1 27 - -
Sebi37g00037 1197 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 700 915 IPR027417 -
Sebi37g00037 1197 MobiDBLite consensus disorder prediction 109 256 - -
Sebi37g00037 1197 MobiDBLite consensus disorder prediction 1073 1100 - -
Sebi37g00037 1197 Gene3D - 374 644 IPR027417 -
Sebi37g00037 1197 MobiDBLite consensus disorder prediction 66 80 - -
Sebi37g00037 1197 PANTHER AAA DOMAIN-CONTAINING 1069 1175 IPR045199 -
Sebi37g00037 1197 ProSiteProfiles Bromodomain profile. 919 981 IPR001487 GO:0005515
Sebi37g00037 1197 Pfam ATPase family associated with various cellular activities (AAA) 416 551 IPR003959 GO:0005524|GO:0016887
Sebi37g00037 1197 FunFam ATPase family AAA domain-containing protein 2B 552 637 - -
Sebi37g00037 1197 ProSitePatterns AAA-protein family signature. 521 539 IPR003960 GO:0005524|GO:0016887
Sebi37g00037 1197 FunFam ATPase family, AAA domain-containing 2 374 557 - -
Sebi37g00037 1197 SMART bromo_6 896 1003 IPR001487 GO:0005515
Sebi37g00037 1197 SMART AAA_5 412 553 IPR003593 GO:0016887
Sebi37g00037 1197 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 375 641 IPR027417 -
Sebi37g00037 1197 MobiDBLite consensus disorder prediction 62 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi37g00037 Sebi-Chr37 1699471 1707031 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi37g00037 362 616 Calmodulin-binding Proteins AT3G56690 36.293 9.05e-41 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi37g00037 K22531 - gmx:100787765 2010.34