LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi37g00019	ATGGGTGCACATGTAGCAGGATCTTTCATTCAAGATCCAAATATCCACCTGGCTAAGAAACCTAGGCTGGATATCAAGCAGGATGATATAATGCAACAGCAGCGTCCACATGATAGTGGTGTTGGTGGGGTATGTTCCCGCCGATTAATGCAGTACCTCTATCATCAAAGGCAACGGCCACCTGTGAGTTCTGTTTGTTTGCTTTATGTGATCATCTGTCTTATGATTCCTTTAGCCCTTACAGCAGTGATGATCTATGATTTGTGTGATGTGGATAATAGCATTGGCTATTGGAGAAAATTTGTGGCCGAATATTACTCTCCTCGTGCAAAGCAACGTTGGTGCTTGTCATTATATAGTAATGTTGGGCAACATGCATTTGGTGTTTTCCCCCAAGTGGCTATGGGTGCATGGCAGTGTGACATATGTGGTTCTAAATCTGGAAAGGGATTTGAGGCAACTTTTGATGTACTGCCTAGACTTAATGAAATCAAATTTGGCAGTGGATTGATCGATGAACTTTTGTTTTTGGACATGCCACGTGAAATAAGATCTCCTTCTGGTGCGATGATGTTAGAATATACAAAAGCTGTTCAAGAGTGTGTGTATGAGCAGCTTCGCGTTGTTCGTGAGGGTCAACTCCGTATCATATTCACTCAAGACCTGAAGATATTTTCTTGGGAGTTCTGTGCAAGGCGCCATGAAGAACTTCTTCCTCGAAAGTTGGTTGCACCACAGGTCAACCAATTGGTTCAGGTAGCTCAAAAATGCCAGAGTACAATTGCTGAAAGTGGGTCAGATGGGGTTTCTCAGCAAGACTTGCAAACAAACAGCAACATGGTTTTGACAGCTGGCCGTCAGCTTGCAAAGAGTTTGGAGCTACAATCACTAAATGACTTGGGCTTTTCAAAAAGATATGTGAGGTGTTTGCAGATTTCTGAAGTTTGCAATAGCATGAAAGATCTCATAGATACCTGTTATGATCGCAAAATTGGAGCAATTGAGAGCTTGAAAGAATTTCCTCGAGTCACGGCTGAAGCAAAGCTCCAGATGCAAAAGATGCCAGAGATGGAACAGCTAGCAAATGTTCAAGGTCTGCCCACTGATCGTAACACACTTAATAAGCTGATGGCAATGAATCCTGCAATGAACAACCATATAAACAACAATCACAACAATATGGTTAATCGTGGTGGTTCTTTGGGTGGGTCAGCACAAGCTGCTATGGCACTGACCAACTACCAGAGTCTTGTGAGGCAAAACTCAACGAATTCAAGCCCTGGCTCACTTCAGCGAGAAAGACCCTCTTTCAGTAACACAAACCAGAGTCCCTCTTCCGCTGTGCAAGGTGCTGGATCCCAAGGAAATCAAGCTCTGGATCAGCAGATGATCCAGCAAATACTGCAGATGTCAAATAACAATGGGGGAGTGCAACCACAGTCTCTTGGTGGACCCAATGCAAATGGGAATATGGCAAAGAGTGGGTTGGGTTTTGGGAGCCAAACTCCAGCCATAAGTGGAGGCTCTGCCAATGTTCCTGGGAATAATCGACCTGTTTCAAGGAGTAATAGCTTCAAGGCGGCTTCAAACAGTGATTCTTCTGCAGCTGGAGGCAACAATGGATTCAACCAGAGAACATCTGATATGTCACAAAATCTCCATTTGCAAGATGTGGTTCATAACATTGCCCCTGAGTTCACGGATAATCACTTCTTTAACAGTGATCTAGATGATAACATGGGTTTTGACTGGAAGGCATGA	1761	0.4384	MGAHVAGSFIQDPNIHLAKKPRLDIKQDDIMQQQRPHDSGVGGVCSRRLMQYLYHQRQRPPVSSVCLLYVIICLMIPLALTAVMIYDLCDVDNSIGYWRKFVAEYYSPRAKQRWCLSLYSNVGQHAFGVFPQVAMGAWQCDICGSKSGKGFEATFDVLPRLNEIKFGSGLIDELLFLDMPREIRSPSGAMMLEYTKAVQECVYEQLRVVREGQLRIIFTQDLKIFSWEFCARRHEELLPRKLVAPQVNQLVQVAQKCQSTIAESGSDGVSQQDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRYVRCLQISEVCNSMKDLIDTCYDRKIGAIESLKEFPRVTAEAKLQMQKMPEMEQLANVQGLPTDRNTLNKLMAMNPAMNNHINNNHNNMVNRGGSLGGSAQAAMALTNYQSLVRQNSTNSSPGSLQRERPSFSNTNQSPSSAVQGAGSQGNQALDQQMIQQILQMSNNNGGVQPQSLGGPNANGNMAKSGLGFGSQTPAISGGSANVPGNNRPVSRSNSFKAASNSDSSAAGGNNGFNQRTSDMSQNLHLQDVVHNIAPEFTDNHFFNSDLDDNMGFDWKA	586

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi37g00019	586	PANTHER	LIM DOMAIN-BINDING PROTEIN	32	572	IPR029005	-
	Sebi37g00019	586	Pfam	LIM-domain binding protein	92	338	IPR029005	-
	Sebi37g00019	586	MobiDBLite	consensus disorder prediction	420	456	-	-
	Sebi37g00019	586	MobiDBLite	consensus disorder prediction	472	547	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi37g00019	Sebi-Chr37	726868	731690	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sebi37g00019	43	347	C2H2 Transcription Factor Family	AT1G43850	52.131	1.76e-100	322

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi37g00019	-		-	gmx:100816886	769.229