Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi379g00008 ATGGATGATCCCATAGATCAGTTTCCTATAGGAATGCGTGTTCTTGCTGTTGATGATGACCCAACATGTCTCATGGTTTTGGAGACTCTGCTCAGAAGGTGTCAATACAATGTAACTGCAACTAAAAATGCAATATCGGCACTGAAATTGTTGAGAGAAAACAAAAACAGGTTTGACTTGGTAATCAGTGATGTTCACATGCCAGACATGGATGGCTTTAAGCTGCTTGAGCTTGTGGGTCTTGAGATGGACCTACCTGTCATAATGTTGTCTGTAAATGATGACCCAAAGATGGTGATGAAGGGAATAACTCATGGAGCTTGTGATTATTTGTTGAAACCTGTTAGAATTGAGGAGTTACAGAACATTTGGCAGCATGTAATAAGGAGGAAGAAGATTGATCTGAAGGAGCTGAACAAAACCAGCAACGAAGACACCCTTAATTCTGAGGCTGTACCTAAAAAAATTCTTGATTTAATGAATGTTGAAAAGCTCACAAGGGAAAATAAATATAGACTTTATCTGAAAAGAATCAGCTGTGAGGCAAACCAACAAGCTAATATGGTGGCGGCCTTAGGTGGTGCAGATACATCTTATTTGGGAATGAGTTCTCTAAGTGGGGTTAGACATTTGCACTCATTGAGTGGTTCTAGACAGTATGATAACAACCCTTTCAGACCCTTTGCACCTGGTGGGATGATGAGTAGATTGAACACTCCTGCTAGTCTGAATCTTCCTGGGTTGTCTTCTTCTGGATCTCTTCAGTTGGGACATGCACAAAATGTAAACAAAAACACAAATGATCAGCTTAAGTTCCAATCAGCCATAGCTCATGGAAATCAGAGTGGTGGTCAGGGAAGGCCAATTTCTGTAGGGCTAGATCAGTTGCAACACAACAAGGGTGTTAGTCCTATTCTTTTAGATCAGAAAACAAAAGTAACAATGGGTTTCTCACCTTCTGTTTTGAATATATCAAACAATGGCTTGGTGTTGGAAGCAAATCCACAAGACAAACAAGTTGGTGGAGTATATGAAAATTCAACTTCAGCGGCCTCTCAACTTTCACAATTTTCTGTGCTGGATAATGACAGGTGTAATGATATTTGGTCAAGTGCTATACAAACATCTGAGACAAATTCTTATCTTCCAAGTGAATATTTTGGACAACCATCTATGCTTCCTACAGATATGATGACTTCTGTACCCTTGCAAGGGGGGAATTCGAGTGGACCCTTGCAAGGGGGGAATTTGAGTGCTGTTTCATCCATCACTCCATTGTCCACTCAACCCCATACATTAACAAATATGCACTCCCAAGGTGTCAATTTTACAATTGTTCCTGAGCAAGTAAACAGTAATCTTCCATTTCAAGGGTGGGATAACAATAATCAAGATGGTAGTTACCATTCTCAAGTTATTGGTAGCCCAATAGGCTCTCTGATTACTGTGAATGGTGCAGCTGATCCAGAAGGCCATACTCCAATCAACTCAACCTTCAACAGAAACCTGGACTTTGATTTTTGTGATCCCTTACAAATGAAGCATGATGGGATCATTGAATTAACTGAAGAGACCTCATTGAAACCAAATCAACATATGATGAACCTGCAGAAGTCTCAAAATAGTCGCATCATCTCTAATAATCTTGGCTCACTGGAAGACTTGGTCACTACAATGATGAAACAGTAA 1689 0.4008 MDDPIDQFPIGMRVLAVDDDPTCLMVLETLLRRCQYNVTATKNAISALKLLRENKNRFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSVNDDPKMVMKGITHGACDYLLKPVRIEELQNIWQHVIRRKKIDLKELNKTSNEDTLNSEAVPKKILDLMNVEKLTRENKYRLYLKRISCEANQQANMVAALGGADTSYLGMSSLSGVRHLHSLSGSRQYDNNPFRPFAPGGMMSRLNTPASLNLPGLSSSGSLQLGHAQNVNKNTNDQLKFQSAIAHGNQSGGQGRPISVGLDQLQHNKGVSPILLDQKTKVTMGFSPSVLNISNNGLVLEANPQDKQVGGVYENSTSAASQLSQFSVLDNDRCNDIWSSAIQTSETNSYLPSEYFGQPSMLPTDMMTSVPLQGGNSSGPLQGGNLSAVSSITPLSTQPHTLTNMHSQGVNFTIVPEQVNSNLPFQGWDNNNQDGSYHSQVIGSPIGSLITVNGAADPEGHTPINSTFNRNLDFDFCDPLQMKHDGIIELTEETSLKPNQHMMNLQKSQNSRIISNNLGSLEDLVTTMMKQ 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi379g00008 562 Gene3D - 9 122 - -
Sebi379g00008 562 CDD REC_typeB_ARR-like 14 128 - -
Sebi379g00008 562 PANTHER TWO-COMPONENT RESPONSE REGULATOR 12 274 IPR045279 GO:0009736
Sebi379g00008 562 Gene3D - 123 179 - -
Sebi379g00008 562 Pfam Response regulator receiver domain 14 122 IPR001789 GO:0000160
Sebi379g00008 562 SUPERFAMILY CheY-like 11 133 IPR011006 -
Sebi379g00008 562 ProSiteProfiles Response regulatory domain profile. 13 128 IPR001789 GO:0000160
Sebi379g00008 562 SMART REC_2 12 124 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi379g00008 Sebi-Chr379 371680 374888 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi379g00008 5 212 Response Regulator Gene Family AT4G31920 49.442 2.20e-69 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sebi379g00008 Response_reg 2.2e-24 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi379g00008 - K14491 gmx:100777171 442.58