Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi377g00037 ATGTTTTCCCTTCATCAAATACCGAAACTTTCTCTCTCAATCGCCAGCAATTCCTTGCTTCCAAAAATTGCAATTCCGAAGCCGCTGAGTGTTTTAGATGGAGCAGAGCGAAACGGCGCTGGATTTAGCTCCGCGGAAATTGGCGAGGCAATTGGATTTCACTGCCGTCTGTGGAGGTCCGGCACAGCTGAAACTCCCGCCGCCGACACCGCAGTCCCTGTCTCAACCGATTCTGCGGCCACCATTGCAGTCGCAGCCGCCGCGCTCTCCATCGCAATCACAATTGGATTTGCAGTCACCAGGGCAACGGCTGTGGTTATATTCACCGCCACAGGAGCAACGGCAGAGAACAACACATTCGCAGGTAATGCCGCAACAATTGCAAGCACCGCGGCCACAGCTAGTTTCGCCGGTTCATCGATTTCCGCATCCCGTGCAGAAACTTCCGGTGAAGATCACGGGTTAAGATGGTATAGAACAGAAGACACTTGCAGTAATTTATTAAATGCGCCGAAAAGAATGATTCTTGGAGAATTTATAAGGAAGCAAGAGTCTCCTAGATCACAACCTCGAAATAATGTGGAATTAAAGGACAGCACTCCAAAGAAACCAAAACAATGCAACTGCAAAAATTCTCGATGCCTCAAATTGTACTGTGAGTGCTTTGCAGCTGGAATCTATTGTGATGGTTGCAATTGTCTAAATTGTCATAATAACGTGGATAATGAGGCTGCCAGACAAGAGGCTGTTGGAATAACATTGGAACGCAACCCAAATGCTTTCAAACCAAAAATTGCTAGCAGTCCACAAGAACCACGAGATTCTAAGTCTGGGACTCTAGGTTTAGCTGATATTTTAGCTGACTATACTTGTGGTGCATTTAAATGTCTTGAACAAACTCAGGAAGATATGTCTGAAATTCAAGTAATAGGAAAGCACAATAAAGGATGTCACTGTAAGAAATCAGGTTGTCTTAAGAAGTATTGTGAGTGCTTCCAAGCCAATATCCTCTGCTCTGAAAATTGTAAATGCATGGACTGCAAGAATTTTGAAGGAAGTGCCGAAAGAAGAGCAATTTTTCATGAAGAGGATAATCTAGTTCACATCAGACAAAAAATTAATGCTGTCATTAGTGGAGCTGTTGGATCCTTAGGCTATGGAACCCACATAACACCCAAGAAGAGAAGAATTCAGGAAATATTTTCTGGCAAATCAGGCATAGCTCAAACTGTTAACATGACTGCTCAATACCAACAGGAAATTGATCCTATAGCTTCATCACCATCTCTGTCCACGTCCTTTGTCTCTGACATTTCCAACACAAGAATTTCAGGGTCTTCAAGATCTACATACAAGTCTGTATTGGCGGATGTCCTCCAGACACAGAATGTGAAGAATCTCTGTTCACTTTTTGTTGTTCTCTCTGGAGTAGCTGCGAAGACAAATTCAGAAATGAGAGACAAAGTAGATCGGCAAATAGGGACTGGGAAATTTGAAGCTTCTATTGCTTCATCAGCTCAATCACCGCAAGAAACTAGAGATACCCACAAGCCTGATTGTGATGATCACATAAATAAAGATGAAGCAAATGCAGTTTATATTGACAATTGTAATAGACCATTGTCACCAGAAACACTAGCATTGATGTGCAATGAACAAGATGAGATGATTTTTGGTGATGGTTCTGCAAATGGAGTGGCATGCAACAGTACATATCAAAATATGATTCAAAAGTCAGCTAATTCTGATGAATGCACTGATGTTTATGGAGAGCAGGAACGGCTTGTCCTGACCAAGTTCTGGGATGTTCTTCGCGGACTCGTTACTCTTGGTAGCATAAAAGAAACAATGTGCTCTTCATTAGCCAGGAAAGAGGTGGGAATCAGGAAAGAACCTGCAGACAATGGCAATGGTGGTACTGAAACTGACACTGGGGCTGAAAAGGGAATTCGTAGCAACTGCGTTGCAAATTGCCCCATTCCAGCGGTTATTGAAATATCTCAGACCAACTATGCAATAACTAATGGACATGGTAATAATGATATTTCATTGAGGTCGCCTGCAAATTTGAATAACTAG 2079 0.4271 MFSLHQIPKLSLSIASNSLLPKIAIPKPLSVLDGAERNGAGFSSAEIGEAIGFHCRLWRSGTAETPAADTAVPVSTDSAATIAVAAAALSIAITIGFAVTRATAVVIFTATGATAENNTFAGNAATIASTAATASFAGSSISASRAETSGEDHGLRWYRTEDTCSNLLNAPKRMILGEFIRKQESPRSQPRNNVELKDSTPKKPKQCNCKNSRCLKLYCECFAAGIYCDGCNCLNCHNNVDNEAARQEAVGITLERNPNAFKPKIASSPQEPRDSKSGTLGLADILADYTCGAFKCLEQTQEDMSEIQVIGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSAERRAIFHEEDNLVHIRQKINAVISGAVGSLGYGTHITPKKRRIQEIFSGKSGIAQTVNMTAQYQQEIDPIASSPSLSTSFVSDISNTRISGSSRSTYKSVLADVLQTQNVKNLCSLFVVLSGVAAKTNSEMRDKVDRQIGTGKFEASIASSAQSPQETRDTHKPDCDDHINKDEANAVYIDNCNRPLSPETLALMCNEQDEMIFGDGSANGVACNSTYQNMIQKSANSDECTDVYGEQERLVLTKFWDVLRGLVTLGSIKETMCSSLARKEVGIRKEPADNGNGGTETDTGAEKGIRSNCVANCPIPAVIEISQTNYAITNGHGNNDISLRSPANLNN 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi377g00037 692 PANTHER TESMIN/TSO1-RELATED 181 606 IPR028307 -
Sebi377g00037 692 MobiDBLite consensus disorder prediction 179 207 - -
Sebi377g00037 692 ProSiteProfiles CRC domain profile. 203 352 IPR005172 -
Sebi377g00037 692 SMART CXC_2 202 242 IPR033467 -
Sebi377g00037 692 SMART CXC_2 312 353 IPR033467 -
Sebi377g00037 692 MobiDBLite consensus disorder prediction 501 522 - -
Sebi377g00037 692 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 315 349 IPR005172 -
Sebi377g00037 692 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 205 239 IPR005172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi377g00037 Sebi-Chr377 937998 943335 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi377g00037 165 626 CPP Transcription Factor Family AT4G29000 45.643 6.20e-126 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Sebi377g00037 TCR 3.8e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi377g00037 - K21776 gmx:100811459 761.911