Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi377g00030 ATGGATCCTATGAGTGAACTAACAGATGAGGATATCAGAGGGCTTGAGTTTGATACAGAAGAGGATGCATATGATTTCTACCGTGAGTATGCTAAATTCATAGGATTTTCTGTAAGGAAAGAGGGAGAGAGGAGTGAGAAGCATCTTAATAGGACTGATAAAATTAGGGAGGCAAAGGCCTTCACCCGAACTGAGTGTAAAGCAAGGCTCCGTGTTTCCTTAGATTATAGAAGTAGAAAGTGGAGGGTTGGAATCTTTGAGCCAGCTCATAACCATGAATTGACTCCTGCAAGTATGATACATTTTCTACCTGCTTATCGTGGGTTGAGTGTAGCGGATAAGGCACAAGTTGACGGTCTACATCATTACGGTGTCAGGACTTGTCATATAATGAGTCTTATAATGGGTCAAAAGGGAGATTTTAAGACCCTAATTTATGGAAATTTTATTCGTCAGAAATTTGAGGATGAGTGGAACAAGGTTGTTGACAAACATGGTGTGAGGGAAAATAGGTGGGTCAGAAAAGTATATGACATGAAGAGGATGTGGGCCACGACATATCTGAGGGATAATTTTTTGGGGGGTATCAGGACAACTTCTATATGTGAAGGGATTAACTATGTTCAGAGCAAAAATAGCCTTGTTGATTTTCTTCACAATTTTGAGAGAGCTCTCAATGAATATAGACACAACGAGTTAACTTCAGATTTCAAGTCGAAATACACTCAACCTGTGATGACTATTGCTTTGGAAAGATATGAAGTTCAAGCTTCAAATGTCTACACGAGGAATAAGTTTTTTGATGTTCGAAAGCAAATTGAGAAAGTTGCTGCCATAAATGTCATTGAGAGGATAGATGTTGGTAATGGCATTACAATGAAGATGAATAAATTTGGCACTCCTGATTCTTCTTATATTGTTACGTTGGATAAGTCTGATGGTAATTTCGTTTGTGATTGTCGCATTGCTATGAAGCATGAGCAAGTGGAATCCATTCCTTCATCTTTGATTTTGAAAAGATGGACTAAGTTGGCTAAAGTTGAGCACATTTCTTTTGTTTATGCTGAAGAAGGTGACACATCAAAGAAAGTTTTATTGAGGTCTGGTGCTGTTGGTGCTGCATGTAACATGCTTAACAAGGCTGCACGTAGAAATCCTCACAATTTTGTAAAGAACATTGAATCTATTCATAAGTTAGCAGAACAGATGGAAAGGCAGGAAGGTATTGACTTGAACATTGCTGATATATCAAGAGTTGTTCGTGACCCAATTGTTGTTAAAACTAAAGGGCACACAGTTAGGACATGCACTAAATATGCTACTCATGATCAGTTGGATACAGTTATTGAAGAGGAATCATCTGTTGAGACTGATGAAGATTCAAGAGATGAAAGTAGGTCACGGGATGTTCTCATTTCTAACCATTTGAATGATGAAACAGTCTCTGCTGGTCAGAATTGTGCTTCAGACAAGGGTCAGTCTAAGAAGAGAAGGAGAAATAGTGAAGGTTTGAAAATGACCCAAGAATCAGTTAATGAAAGGCGGTCCAGTGATGTGAACAAAGGTCAACAGAATGATACTGGTGTTGCATTCAGCAGAATGAATACCCCCTCCTTATTTGGTAATCATGTGTACTATTCAAACATGAATGGTCCGAGTATTTCAAGACCTGTGCATATTAGACCTTCCATGATTCATGGATTTGGGCAAGGATTTGTTGGTAATAGAGTTGAGGACATGCTACAGTATCCCCAAATGTATATGCAGCAATCTATGTATACACCTCCAGTAGTTCATAACTTTGACCAATATGGTAATAGCTTTTAG 1827 0.3853 MDPMSELTDEDIRGLEFDTEEDAYDFYREYAKFIGFSVRKEGERSEKHLNRTDKIREAKAFTRTECKARLRVSLDYRSRKWRVGIFEPAHNHELTPASMIHFLPAYRGLSVADKAQVDGLHHYGVRTCHIMSLIMGQKGDFKTLIYGNFIRQKFEDEWNKVVDKHGVRENRWVRKVYDMKRMWATTYLRDNFLGGIRTTSICEGINYVQSKNSLVDFLHNFERALNEYRHNELTSDFKSKYTQPVMTIALERYEVQASNVYTRNKFFDVRKQIEKVAAINVIERIDVGNGITMKMNKFGTPDSSYIVTLDKSDGNFVCDCRIAMKHEQVESIPSSLILKRWTKLAKVEHISFVYAEEGDTSKKVLLRSGAVGAACNMLNKAARRNPHNFVKNIESIHKLAEQMERQEGIDLNIADISRVVRDPIVVKTKGHTVRTCTKYATHDQLDTVIEEESSVETDEDSRDESRSRDVLISNHLNDETVSAGQNCASDKGQSKKRRRNSEGLKMTQESVNERRSSDVNKGQQNDTGVAFSRMNTPSLFGNHVYYSNMNGPSISRPVHIRPSMIHGFGQGFVGNRVEDMLQYPQMYMQQSMYTPPVVHNFDQYGNSF 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi377g00030 608 MobiDBLite consensus disorder prediction 474 490 - -
Sebi377g00030 608 Pfam FAR1 DNA-binding domain 40 95 IPR004330 -
Sebi377g00030 608 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 9 113 IPR031052 GO:0006355
Sebi377g00030 608 MobiDBLite consensus disorder prediction 473 533 - -
Sebi377g00030 608 MobiDBLite consensus disorder prediction 491 520 - -
Sebi377g00030 608 MobiDBLite consensus disorder prediction 448 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi377g00030 Sebi-Chr377 870781 873585 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi377g00030 FAR1 1.2e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi377g00030 - - vvo:131629359 304.679