Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi376g00028 ATGTGTTCATTCTTAGGTCATTCAATCTTGGTGGTCGCAATCAGGGATATAGTGCCACCACCTCAAAGGGAGGTGTTCAATGATGTTTACATTGCATATGAGCTAATGGACACTGACCTTCACCAAATCATTCGATCTAATCAAGCATTATCAGAGGAACACTGTCAGTATTTTCTCTATCAAATCCTTCGTGGGTTGAAGTACATACATTCTGCAAATGTGCTGCATAGGGACTTAAAACCTAGCAACCTTCTCCTGAATGCCAACTGTGACTTAAAAATTTGTGATTTTGGACTGGCTCGTGTCACCTCTGAAACTGATTTTATGACTGAATATGTTGTTACAAGATGGTACCGTGCACCAGAGCTTCTGTTAAACTCATCTGATTACACAGCAGCAATTGATGTATGGTCTGTTGGTTGTATTTTCATGGAACTGATGGATCGAAAGCCTTTATTTCCTGGCAGAGATCATGTGCATCAGTTGCGTCTATTGATGGAGCTGATTGGCACCCCATCAGAAGCTGATTTGGGGTTTCTGAATGAAAATGCTAAGAGATACATTAGGCAACTACCTCTTTACCGCCGCCAATCTTTCCAAGAAAAGTTTCCTCATGTCCATCCTGAAGCTATAGATCTTGTTGAAAAAATGTTGACTTTTGATCCCAGACAAAGAATTACTGTTGAAGATGCACTGGCACACCCCTACTTAACATCTCTGCATGATATCAGTGATGAACCTGTGTGCATGACTCCTTTCAGCTTTGACTTTGAACAACATGCTTTGACTGAGGAACAGATGAAAGAACTCATATACCGAGAGGCTCTAGCATTTAACCCTGAGTATCAGCAGTAG 855 0.4117 MCSFLGHSILVVAIRDIVPPPQREVFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPSEADLGFLNENAKRYIRQLPLYRRQSFQEKFPHVHPEAIDLVEKMLTFDPRQRITVEDALAHPYLTSLHDISDEPVCMTPFSFDFEQHALTEEQMKELIYREALAFNPEYQQ 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi376g00028 284 Gene3D Transferase(Phosphotransferase) domain 1 36 264 - -
Sebi376g00028 284 Pfam Protein kinase domain 26 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi376g00028 284 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 238 - -
Sebi376g00028 284 SUPERFAMILY Protein kinase-like (PK-like) 12 245 IPR011009 -
Sebi376g00028 284 ProSitePatterns Serine/Threonine protein kinases active-site signature. 74 86 IPR008271 GO:0004672|GO:0006468
Sebi376g00028 284 Gene3D Phosphorylase Kinase; domain 1 11 274 - -
Sebi376g00028 284 ProSiteProfiles Protein kinase domain profile. 1 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi376g00028 284 SMART serkin_6 4 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi376g00028 284 FunFam Mitogen-activated protein kinase 36 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi376g00028 Sebi-Chr376 529955 533518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi376g00028 11 284 MAP Kinase Gene Family AT2G43790 90.511 0.0 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Sebi376g00028 Pkinase 1.1e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi376g00028 K14512 - gmx:547616 556.984