Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sebi376g00022 | ATGACGACAAGGCTTCAAGATCGGACAGTCTCCGGCTATTCCCGCCGAACACCGCCACCTCCGACGGCGGCGAACGGAAGCCTCGCAGCAAGCCAAGCCCGAGGTCGGAGCTACTCTACCTCGGCACGGTGGCAGGCTCAGAGGAAGCCGCGGACTCGAGCTGCAGCGGCAATGGGGATTTTCCGGCCACCTTACCGGAAACTTGGAGACTCGCCGGAGCTTAATCCACTACCTCCACTGCCACGTCAAAACTTCAGGGCTTGGACGAGTACTCCCGTTGTGGCTAGATTGGGTGAACCCTCGCAGCAAAATATTGATGGGGTTGGTGTTAAGAATGAGAATGAAGAGACCCCAAAGCCAAAGTTGAAAGCTTTACATTGGGATAAAGTTAAGGCCAGCTCAGATAGGGCCATGGTTTGGGATCGGTTGAGACCAAGTTCTTTCCAGTTGAATGAGGACATGATTGAGACACTCTTCATGGTAAATAATTCCAATGGAAATTCTGGTTTGGCTTTTAGAGATAATGCTCGGCGTCAAGTAAATCATTCTTCTCCAATGCCACCGGAAAATAGGGTGCTTGACCCTAAAAAGTCTCAGAACATTGCCATTTGCTTCGGGCACTGA | 624 | 0.5144 | MTTRLQDRTVSGYSRRTPPPPTAANGSLAASQARGRSYSTSARWQAQRKPRTRAAAAMGIFRPPYRKLGDSPELNPLPPLPRQNFRAWTSTPVVARLGEPSQQNIDGVGVKNENEETPKPKLKALHWDKVKASSDRAMVWDRLRPSSFQLNEDMIETLFMVNNSNGNSGLAFRDNARRQVNHSSPMPPENRVLDPKKSQNIAICFGH | 207 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sebi376g00022 | 207 | PANTHER | FORMIN-RELATED | 23 | 203 | IPR027643 | GO:0003779|GO:0030036|GO:0045010|GO:0051015 | |
| Sebi376g00022 | 207 | Pfam | Formin Homology 2 Domain | 114 | 205 | IPR015425 | - | |
| Sebi376g00022 | 207 | MobiDBLite | consensus disorder prediction | 1 | 47 | - | - | |
| Sebi376g00022 | 207 | Gene3D | Formin, FH2 domain | 108 | 207 | IPR042201 | - | |
| Sebi376g00022 | 207 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 112 | 207 | IPR015425 | - | |
| Sebi376g00022 | 207 | MobiDBLite | consensus disorder prediction | 1 | 60 | - | - | |
| Sebi376g00022 | 207 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 125 | 206 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Sebi376g00022 | Sebi-Chr376 | 418658 | 419911 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Sebi376g00022 | 115 | 205 | FH2 protein (formin) Gene Family | AT3G25500 | 58.511 | 2.29e-26 | 104 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sebi376g00022 | - | - | aprc:113857957 | 169.088 |