Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi375g00103 ATGGAGTATGAAGATGAAATGCCGTGTGTTAGTCTGGAAGAGTTTTCCCTTGCTACTGATAATGGTAGTAGCAAAGGAAGGATGGGTGGGAAGAGGAACTATGATGATGAGACAAGAGAGTACAAATCCAAGAACCTTGAGACTGAAAGAAGGAGGAGGGAGAAGCTCAGTAGCAGGCTCTTGATTCTGCGGTCTTTAATGAATAAAGCAACCATTATTGATGATGCTATCACCTACATCAAGAAGATGCAAGACAAAGTCCAGAGTCTCAGCCAAGAGCTTCACCAAATGGAAGCAACTTCAGAGGAAACAGCAGAAACAAAGATAGATGAAATTGATGCTGCAGAAGATATGAAGAAATGGGGGATACAGGCAGAGATCAGAGTGGCACAAATCAAAGGGAATAAGCTCTGGGTCAAGATCATCATTGAGCAGAAGAGGGGAAGATTCAATAAATTGATGGAGGCCATGAATAATTTTGACATTGAGTTCATAGATATCAATCTTACAACCACTAAAGGGGCATTTCTCATTACAGGCTGCATACAGGGAAACGATGAGGAGGGACTTGCAGTTCATCAAATCAAGAATTTGTTGCAAGACATTATCAATGACACATAG 621 0.4122 MEYEDEMPCVSLEEFSLATDNGSSKGRMGGKRNYDDETREYKSKNLETERRRREKLSSRLLILRSLMNKATIIDDAITYIKKMQDKVQSLSQELHQMEATSEETAETKIDEIDAAEDMKKWGIQAEIRVAQIKGNKLWVKIIIEQKRGRFNKLMEAMNNFDIEFIDINLTTTKGAFLITGCIQGNDEEGLAVHQIKNLLQDIINDT 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi375g00103 206 SMART finulus 46 89 IPR011598 GO:0046983
Sebi375g00103 206 MobiDBLite consensus disorder prediction 29 50 - -
Sebi375g00103 206 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 25 201 - -
Sebi375g00103 206 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 40 100 IPR036638 GO:0046983
Sebi375g00103 206 MobiDBLite consensus disorder prediction 17 50 - -
Sebi375g00103 206 Coils Coil 73 107 - -
Sebi375g00103 206 Gene3D - 37 109 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi375g00103 Sebi-Chr375 1034751 1035877 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi375g00103 27 203 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G21330 40.206 9.75e-39 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi375g00103 - - gmx:100793107 286.189