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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Sebi375g00089
ATGGCGAATTCCAATTGGGTGTTCGATGATGATTATGGTTATCTAGACCTTGACCCACCCAATTTCTCTTGGTCCTCCTCTCCTCCTCCCACCCTCAGTGTGGAACTAGATGACTCGTATGCAAATTCGGATGGTTTCAAGGAAGCTGGCTCAAAGAAACGGTTGAGGTCAGGATCCTGCAACACATCTGCTTCCAAAGCATGCAGAGAAAAAATGCGAAGGGATCGGCTGAATGACAGATTTGTGGAACTGGGTTCTATTCTGGACCCTGGGAGGCCTCCTAAAATGGACAAGGCTGTTATATTGAGTGATGCAGTTCGAGTGGTGTCTCAGCTACGAGAAGAGGCTCAGAAGCTCAAAGAGTCTACCGAGAATCTACAGGAGAAAATCAATGAATTGAAGGCTGAGAAAAATGAGCTTCGTGATGAGAAGCAGCGACTAAAAACAGAGAAAGATAACCTTGAGCAGAAGCTTAAAGCCTTGAATTCACAACCTAGCTTCTTGCACCAACCCCCCACCCTCCCAGCTGCGTTTCCTGCACCAGGACAAGTTGTTGGCAGCAAATTGGTGCCTTTCATGGGCTACCCAGGAGTTTCCATGTGGCAGTTTTTACCACCTGCTGCTGTTGATACCTCTCAGGACCATGTATTACGGCCCCCAGTTGCATAA
669
0.4768
MANSNWVFDDDYGYLDLDPPNFSWSSSPPPTLSVELDDSYANSDGFKEAGSKKRLRSGSCNTSASKACREKMRRDRLNDRFVELGSILDPGRPPKMDKAVILSDAVRVVSQLREEAQKLKESTENLQEKINELKAEKNELRDEKQRLKTEKDNLEQKLKALNSQPSFLHQPPTLPAAFPAPGQVVGSKLVPFMGYPGVSMWQFLPPAAVDTSQDHVLRPPVA
222
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Sebi375g00089
222
PANTHER
BHLH TRANSCRIPTION FACTOR
3
222
IPR044818
GO:0003700|GO:0006355|GO:0006879|GO:0046983
Sebi375g00089
222
MobiDBLite
consensus disorder prediction
43
69
-
-
Sebi375g00089
222
Pfam
Helix-loop-helix DNA-binding domain
64
112
IPR011598
GO:0046983
Sebi375g00089
222
CDD
bHLH_AtILR3_like
66
141
-
-
Sebi375g00089
222
Gene3D
arf6 gtpase in complex with a specific effector, jip4
111
165
-
-
Sebi375g00089
222
FunFam
Transcription factor bHLH34
52
110
-
-
Sebi375g00089
222
SUPERFAMILY
HLH, helix-loop-helix DNA-binding domain
61
132
IPR036638
GO:0046983
Sebi375g00089
222
Gene3D
-
53
110
IPR036638
GO:0046983
Sebi375g00089
222
ProSiteProfiles
Myc-type, basic helix-loop-helix (bHLH) domain profile.
61
112
IPR011598
GO:0046983
Sebi375g00089
222
Coils
Coil
102
164
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Sebi375g00089
Sebi-Chr375
937042
938921
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Sebi375g00089
3
222
Basic Helix-Loop-Helix Transcription Factor Gene Family
AT5G54680
62.009
1.07e-95
277
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
bHLH
Sebi375g00089
HLH
3.9e-10
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Sebi375g00089
-
-
ccaj:109814067
338.191
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