Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi375g00073 ATGGAGATTTCATCAGTCAGGGGGTTACCTGAACAGGGGATAATAGAGGATCCTAACTTTCTCCATCAGTGGCACTTAAGTTCCATTGATACAACTAGCTTAACAGCTGCTGCTTTTGGAGAGGCTTTACAAAAACATTCATTCTCTAATAGCACAAACTTCAACACCAAAACCTCCATGGAAACTTCACTCAATGGAATGGAAAGACCCACAAAACAGCTCAAAAACAACAGCTGGAACCACAACAAAAGCCCTCAGACAACAACAGATACTCAACTTGCTTCTTGCTCAAATCTTCTTTCATTTGTTGATTCGAATTACACTAGTCAATGGGGACTAATGAAGCCAAAGGTAGAGATGGTGTGTCCTAAAATGGATAACACTACTCTTGCAAACATGTTGATCTCTCAAGGAAACTTGGTGAATGAAAACTATGTCTTTAAAACTTCTTGCCAAGAGGCCAAAAAGATTATGAATCATCCTAAACTTTCTCAACCTCAAGACCACGTAATAGCTGAAAGGAAGAGGCGAGAGAAGCTCAGCCAGCGGTTCATTGCTCTATCTGCTCTTGTTCCGGGCCTAAAAAAGATGGACAAAGCTTCTGTTCTTGGAGAGGCTATCAAGTACTTGAAGCAAATGCAAGAGAAAGTGAGTGCTCTTGAGGAGGAACAGAACAGGATGAAAACTGTGGAATCTGTGGTAATTGTGAAAAAATCTCAACTATCTAATGACGGTGAAGACTCTTCTTCAGGTACATTTGACGAGACACTGCCTGAAATTGAAGCAAGATTTTGTGAATCAAATGTGCTCATAAGACTGCACTGTCTGAAGGATAAAGGAGTTATAGAGAAAACAATCAGCGAAATTGAGAAACTCCATCTAAAGTCATCAATAGCAATGCCATGA 906 0.4018 MEISSVRGLPEQGIIEDPNFLHQWHLSSIDTTSLTAAAFGEALQKHSFSNSTNFNTKTSMETSLNGMERPTKQLKNNSWNHNKSPQTTTDTQLASCSNLLSFVDSNYTSQWGLMKPKVEMVCPKMDNTTLANMLISQGNLVNENYVFKTSCQEAKKIMNHPKLSQPQDHVIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKQMQEKVSALEEEQNRMKTVESVVIVKKSQLSNDGEDSSSGTFDETLPEIEARFCESNVLIRLHCLKDKGVIEKTISEIEKLHLKSSIAMP 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi375g00073 301 CDD bHLH_AtNAI1_like 167 239 - -
Sebi375g00073 301 Coils Coil 203 230 - -
Sebi375g00073 301 PANTHER BHLH TRANSCRIPTION FACTOR 39 295 - -
Sebi375g00073 301 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 164 213 IPR011598 GO:0046983
Sebi375g00073 301 SMART finulus 170 219 IPR011598 GO:0046983
Sebi375g00073 301 Pfam Helix-loop-helix DNA-binding domain 167 214 IPR011598 GO:0046983
Sebi375g00073 301 MobiDBLite consensus disorder prediction 63 90 - -
Sebi375g00073 301 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 169 241 IPR036638 GO:0046983
Sebi375g00073 301 Gene3D - 164 235 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi375g00073 Sebi-Chr375 834094 836107 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi375g00073 1 294 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 36.774 1.02e-43 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sebi375g00073 HLH 2.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi375g00073 - - gmx:100798018 473.011